Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim50Q810I2 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim50Q810I2 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trim50Q810I2 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim50Q810I2 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim50Q810I2 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim50Q810I2 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim50Q810I2 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim50Q810I2 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trim50Q810I2 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim50Q810I2 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trim50Q810I2 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim50Q810I2 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Trim50Q810I2 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.22□□□□□ -0.13
Trim50Q810I2 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim50Q810I2 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.22□□□□□ -0.13
Trim50Q810I2 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.22□□□□□ -0.13
Trim50Q810I2 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim50Q810I2 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim50Q810I2 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.22□□□□□ -0.13
Trim50Q810I2 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.22□□□□□ -0.13
Trim50Q810I2 Gm9726-201ENSMUST00000180321 678 ntBASIC14.22□□□□□ -0.13
Trim50Q810I2 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.22□□□□□ -0.13
Trim50Q810I2 Gm2451-201ENSMUST00000199447 999 ntBASIC14.22□□□□□ -0.13
Trim50Q810I2 Gm10290-201ENSMUST00000200451 999 ntBASIC14.22□□□□□ -0.13
Trim50Q810I2 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim50Q810I2 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim50Q810I2 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim50Q810I2 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.22□□□□□ -0.13
Trim50Q810I2 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim50Q810I2 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim50Q810I2 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim50Q810I2 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim50Q810I2 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.22□□□□□ -0.13
Trim50Q810I2 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Trim50Q810I2 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim50Q810I2 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Trim50Q810I2 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.22□□□□□ -0.13
Trim50Q810I2 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Trim50Q810I2 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim50Q810I2 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Trim50Q810I2 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim50Q810I2 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim50Q810I2 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trim50Q810I2 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trim50Q810I2 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.21□□□□□ -0.13
Trim50Q810I2 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.21□□□□□ -0.13
Trim50Q810I2 Gm15483-201ENSMUST00000120338 456 ntBASIC14.21□□□□□ -0.13
Trim50Q810I2 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim50Q810I2 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.21□□□□□ -0.13
Trim50Q810I2 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.21□□□□□ -0.13
Trim50Q810I2 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim50Q810I2 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim50Q810I2 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim50Q810I2 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim50Q810I2 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim50Q810I2 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim50Q810I2 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trim50Q810I2 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
Trim50Q810I2 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim50Q810I2 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim50Q810I2 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim50Q810I2 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trim50Q810I2 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim50Q810I2 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trim50Q810I2 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim50Q810I2 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trim50Q810I2 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trim50Q810I2 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim50Q810I2 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim50Q810I2 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim50Q810I2 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim50Q810I2 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim50Q810I2 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim50Q810I2 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trim50Q810I2 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim50Q810I2 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.2□□□□□ -0.14
Trim50Q810I2 Gm11594-201ENSMUST00000122313 162 ntBASIC14.2□□□□□ -0.14
Trim50Q810I2 Gm11025-201ENSMUST00000140773 466 ntBASIC14.2□□□□□ -0.14
Trim50Q810I2 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.2□□□□□ -0.14
Trim50Q810I2 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim50Q810I2 Gm45612-201ENSMUST00000211320 160 ntBASIC14.2□□□□□ -0.14
Trim50Q810I2 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim50Q810I2 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.2□□□□□ -0.14
Trim50Q810I2 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trim50Q810I2 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim50Q810I2 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim50Q810I2 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.2□□□□□ -0.14
Trim50Q810I2 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim50Q810I2 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim50Q810I2 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trim50Q810I2 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim50Q810I2 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim50Q810I2 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Trim50Q810I2 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim50Q810I2 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim50Q810I2 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim50Q810I2 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Trim50Q810I2 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim50Q810I2 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms