Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk3bQ80YF6 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk3bQ80YF6 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.36□□□□□ -0.43
Upk3bQ80YF6 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Upk3bQ80YF6 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.36□□□□□ -0.43
Upk3bQ80YF6 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Upk3bQ80YF6 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk3bQ80YF6 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk3bQ80YF6 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.36□□□□□ -0.43
Upk3bQ80YF6 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.36□□□□□ -0.43
Upk3bQ80YF6 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Upk3bQ80YF6 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk3bQ80YF6 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.36□□□□□ -0.43
Upk3bQ80YF6 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Upk3bQ80YF6 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk3bQ80YF6 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Upk3bQ80YF6 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk3bQ80YF6 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk3bQ80YF6 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk3bQ80YF6 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Upk3bQ80YF6 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk3bQ80YF6 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Upk3bQ80YF6 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.36□□□□□ -0.43
Upk3bQ80YF6 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.36□□□□□ -0.43
Upk3bQ80YF6 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk3bQ80YF6 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk3bQ80YF6 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Upk3bQ80YF6 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.35□□□□□ -0.43
Upk3bQ80YF6 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3bQ80YF6 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3bQ80YF6 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3bQ80YF6 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3bQ80YF6 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3bQ80YF6 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3bQ80YF6 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3bQ80YF6 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3bQ80YF6 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Upk3bQ80YF6 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3bQ80YF6 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.35□□□□□ -0.43
Upk3bQ80YF6 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC12.35□□□□□ -0.43
Upk3bQ80YF6 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.35□□□□□ -0.43
Upk3bQ80YF6 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3bQ80YF6 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3bQ80YF6 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.35□□□□□ -0.43
Upk3bQ80YF6 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3bQ80YF6 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Upk3bQ80YF6 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3bQ80YF6 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Upk3bQ80YF6 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC12.35□□□□□ -0.43
Upk3bQ80YF6 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Upk3bQ80YF6 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Upk3bQ80YF6 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3bQ80YF6 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC12.35□□□□□ -0.43
Upk3bQ80YF6 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3bQ80YF6 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3bQ80YF6 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Upk3bQ80YF6 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3bQ80YF6 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3bQ80YF6 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3bQ80YF6 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3bQ80YF6 Gm37500-201ENSMUST00000192059 1443 ntBASIC12.35□□□□□ -0.43
Upk3bQ80YF6 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3bQ80YF6 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Upk3bQ80YF6 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3bQ80YF6 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3bQ80YF6 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Upk3bQ80YF6 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3bQ80YF6 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3bQ80YF6 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.35□□□□□ -0.43
Upk3bQ80YF6 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3bQ80YF6 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Upk3bQ80YF6 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3bQ80YF6 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3bQ80YF6 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3bQ80YF6 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3bQ80YF6 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Upk3bQ80YF6 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3bQ80YF6 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3bQ80YF6 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3bQ80YF6 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3bQ80YF6 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Upk3bQ80YF6 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Upk3bQ80YF6 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3bQ80YF6 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.34□□□□□ -0.43
Upk3bQ80YF6 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3bQ80YF6 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3bQ80YF6 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3bQ80YF6 Gm13418-201ENSMUST00000119097 944 ntBASIC12.34□□□□□ -0.43
Upk3bQ80YF6 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3bQ80YF6 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC12.34□□□□□ -0.43
Upk3bQ80YF6 Gm9726-201ENSMUST00000180321 678 ntBASIC12.34□□□□□ -0.43
Upk3bQ80YF6 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.34□□□□□ -0.43
Upk3bQ80YF6 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3bQ80YF6 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3bQ80YF6 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3bQ80YF6 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3bQ80YF6 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3bQ80YF6 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Upk3bQ80YF6 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3bQ80YF6 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms