Protein–RNA interactions for Protein: Q80XC6

Nrde2, Protein NRDE2 homolog, mousemouse

Predictions only

Length 1,172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nrde2Q80XC6 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nrde2Q80XC6 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nrde2Q80XC6 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.86□□□□□ -0.03
Nrde2Q80XC6 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nrde2Q80XC6 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nrde2Q80XC6 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nrde2Q80XC6 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nrde2Q80XC6 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.86□□□□□ -0.03
Nrde2Q80XC6 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nrde2Q80XC6 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nrde2Q80XC6 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Nrde2Q80XC6 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Nrde2Q80XC6 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nrde2Q80XC6 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nrde2Q80XC6 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nrde2Q80XC6 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.86□□□□□ -0.03
Nrde2Q80XC6 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nrde2Q80XC6 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nrde2Q80XC6 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nrde2Q80XC6 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nrde2Q80XC6 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nrde2Q80XC6 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Nrde2Q80XC6 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Nrde2Q80XC6 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nrde2Q80XC6 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.85□□□□□ -0.03
Nrde2Q80XC6 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.85□□□□□ -0.03
Nrde2Q80XC6 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nrde2Q80XC6 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nrde2Q80XC6 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nrde2Q80XC6 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nrde2Q80XC6 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nrde2Q80XC6 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nrde2Q80XC6 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nrde2Q80XC6 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.85□□□□□ -0.03
Nrde2Q80XC6 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nrde2Q80XC6 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.85□□□□□ -0.03
Nrde2Q80XC6 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nrde2Q80XC6 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nrde2Q80XC6 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nrde2Q80XC6 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nrde2Q80XC6 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Nrde2Q80XC6 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nrde2Q80XC6 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nrde2Q80XC6 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nrde2Q80XC6 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nrde2Q80XC6 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Nrde2Q80XC6 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nrde2Q80XC6 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
Nrde2Q80XC6 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.85□□□□□ -0.03
Nrde2Q80XC6 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nrde2Q80XC6 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Nrde2Q80XC6 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nrde2Q80XC6 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.84□□□□□ -0.03
Nrde2Q80XC6 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nrde2Q80XC6 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Nrde2Q80XC6 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.84□□□□□ -0.03
Nrde2Q80XC6 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nrde2Q80XC6 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nrde2Q80XC6 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.84□□□□□ -0.03
Nrde2Q80XC6 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nrde2Q80XC6 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nrde2Q80XC6 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Nrde2Q80XC6 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nrde2Q80XC6 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Nrde2Q80XC6 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nrde2Q80XC6 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.84□□□□□ -0.03
Nrde2Q80XC6 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nrde2Q80XC6 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nrde2Q80XC6 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nrde2Q80XC6 Gm27920-201ENSMUST00000183953 96 ntBASIC14.84□□□□□ -0.03
Nrde2Q80XC6 Gm43767-201ENSMUST00000198933 381 ntBASIC14.84□□□□□ -0.03
Nrde2Q80XC6 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.84□□□□□ -0.03
Nrde2Q80XC6 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nrde2Q80XC6 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nrde2Q80XC6 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nrde2Q80XC6 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Nrde2Q80XC6 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nrde2Q80XC6 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Nrde2Q80XC6 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nrde2Q80XC6 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nrde2Q80XC6 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Nrde2Q80XC6 Syt7-205ENSMUST00000224135 1557 ntBASIC14.84□□□□□ -0.03
Nrde2Q80XC6 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nrde2Q80XC6 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nrde2Q80XC6 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Nrde2Q80XC6 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nrde2Q80XC6 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nrde2Q80XC6 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nrde2Q80XC6 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nrde2Q80XC6 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.84□□□□□ -0.03
Nrde2Q80XC6 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nrde2Q80XC6 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Nrde2Q80XC6 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nrde2Q80XC6 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Nrde2Q80XC6 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
Nrde2Q80XC6 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.83□□□□□ -0.03
Nrde2Q80XC6 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nrde2Q80XC6 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nrde2Q80XC6 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nrde2Q80XC6 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms