Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf40bQ80W14 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf40bQ80W14 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.85■□□□□ 0.29
Prpf40bQ80W14 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Prpf40bQ80W14 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf40bQ80W14 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf40bQ80W14 Gm13015-201ENSMUST00000118674 204 ntBASIC16.85■□□□□ 0.29
Prpf40bQ80W14 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.85■□□□□ 0.29
Prpf40bQ80W14 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf40bQ80W14 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC16.85■□□□□ 0.29
Prpf40bQ80W14 Gm10499-201ENSMUST00000174094 934 ntBASIC16.85■□□□□ 0.29
Prpf40bQ80W14 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf40bQ80W14 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Prpf40bQ80W14 Gm18049-201ENSMUST00000208909 581 ntBASIC16.85■□□□□ 0.29
Prpf40bQ80W14 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Prpf40bQ80W14 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Prpf40bQ80W14 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC16.85■□□□□ 0.29
Prpf40bQ80W14 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Prpf40bQ80W14 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf40bQ80W14 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC16.85■□□□□ 0.29
Prpf40bQ80W14 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
Prpf40bQ80W14 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf40bQ80W14 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf40bQ80W14 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf40bQ80W14 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf40bQ80W14 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf40bQ80W14 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf40bQ80W14 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.84■□□□□ 0.29
Prpf40bQ80W14 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf40bQ80W14 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf40bQ80W14 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf40bQ80W14 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf40bQ80W14 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf40bQ80W14 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf40bQ80W14 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf40bQ80W14 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf40bQ80W14 Gm15653-201ENSMUST00000119247 907 ntBASIC16.84■□□□□ 0.29
Prpf40bQ80W14 Gm23984-201ENSMUST00000157139 203 ntBASIC16.84■□□□□ 0.29
Prpf40bQ80W14 Gm6218-201ENSMUST00000219812 628 ntBASIC16.84■□□□□ 0.29
Prpf40bQ80W14 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf40bQ80W14 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.84■□□□□ 0.29
Prpf40bQ80W14 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.84■□□□□ 0.29
Prpf40bQ80W14 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Prpf40bQ80W14 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf40bQ80W14 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.84■□□□□ 0.29
Prpf40bQ80W14 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf40bQ80W14 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Prpf40bQ80W14 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf40bQ80W14 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Prpf40bQ80W14 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.29
Prpf40bQ80W14 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Prpf40bQ80W14 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.83■□□□□ 0.29
Prpf40bQ80W14 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf40bQ80W14 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf40bQ80W14 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf40bQ80W14 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf40bQ80W14 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf40bQ80W14 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf40bQ80W14 Mir7085-201ENSMUST00000184353 66 ntBASIC16.83■□□□□ 0.28
Prpf40bQ80W14 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC16.83■□□□□ 0.28
Prpf40bQ80W14 Gm45384-201ENSMUST00000210451 277 ntBASIC16.83■□□□□ 0.28
Prpf40bQ80W14 Gm7775-201ENSMUST00000218871 853 ntBASIC16.83■□□□□ 0.28
Prpf40bQ80W14 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Prpf40bQ80W14 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Prpf40bQ80W14 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf40bQ80W14 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf40bQ80W14 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf40bQ80W14 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf40bQ80W14 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf40bQ80W14 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf40bQ80W14 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Prpf40bQ80W14 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Prpf40bQ80W14 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf40bQ80W14 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf40bQ80W14 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf40bQ80W14 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf40bQ80W14 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf40bQ80W14 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf40bQ80W14 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Prpf40bQ80W14 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Prpf40bQ80W14 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf40bQ80W14 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf40bQ80W14 Gm11478-201ENSMUST00000117851 599 ntBASIC16.82■□□□□ 0.28
Prpf40bQ80W14 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
Prpf40bQ80W14 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC16.82■□□□□ 0.28
Prpf40bQ80W14 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf40bQ80W14 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC16.82■□□□□ 0.28
Prpf40bQ80W14 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Prpf40bQ80W14 Gm8116-201ENSMUST00000182917 1201 ntBASIC16.82■□□□□ 0.28
Prpf40bQ80W14 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf40bQ80W14 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Prpf40bQ80W14 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf40bQ80W14 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.82■□□□□ 0.28
Prpf40bQ80W14 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf40bQ80W14 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Prpf40bQ80W14 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf40bQ80W14 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf40bQ80W14 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf40bQ80W14 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf40bQ80W14 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms