Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim62Q80V85 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim62Q80V85 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC15.11■□□□□ 0.01
Trim62Q80V85 Gm7774-201ENSMUST00000200064 533 ntBASIC15.11■□□□□ 0.01
Trim62Q80V85 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.11■□□□□ 0.01
Trim62Q80V85 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Trim62Q80V85 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim62Q80V85 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim62Q80V85 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim62Q80V85 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim62Q80V85 Efs-202ENSMUST00000227037 2540 ntBASIC15.11■□□□□ 0.01
Trim62Q80V85 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim62Q80V85 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim62Q80V85 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim62Q80V85 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.11■□□□□ 0.01
Trim62Q80V85 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim62Q80V85 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim62Q80V85 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim62Q80V85 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Trim62Q80V85 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.1■□□□□ 0.01
Trim62Q80V85 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim62Q80V85 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim62Q80V85 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim62Q80V85 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim62Q80V85 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Trim62Q80V85 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim62Q80V85 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim62Q80V85 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim62Q80V85 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim62Q80V85 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim62Q80V85 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim62Q80V85 Mir449b-201ENSMUST00000104833 80 ntBASIC15.1■□□□□ 0.01
Trim62Q80V85 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Trim62Q80V85 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trim62Q80V85 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim62Q80V85 Gm37171-201ENSMUST00000192636 1185 ntBASIC15.1■□□□□ 0.01
Trim62Q80V85 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC15.1■□□□□ 0.01
Trim62Q80V85 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim62Q80V85 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim62Q80V85 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim62Q80V85 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trim62Q80V85 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim62Q80V85 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim62Q80V85 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.1■□□□□ 0.01
Trim62Q80V85 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.1■□□□□ 0.01
Trim62Q80V85 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Trim62Q80V85 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim62Q80V85 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim62Q80V85 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.09■□□□□ 0.01
Trim62Q80V85 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim62Q80V85 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.09■□□□□ 0.01
Trim62Q80V85 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim62Q80V85 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim62Q80V85 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim62Q80V85 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim62Q80V85 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim62Q80V85 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim62Q80V85 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trim62Q80V85 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim62Q80V85 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim62Q80V85 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim62Q80V85 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim62Q80V85 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC15.09■□□□□ 0.01
Trim62Q80V85 Gm27430-201ENSMUST00000184585 107 ntBASIC15.09■□□□□ 0.01
Trim62Q80V85 Gm44333-201ENSMUST00000197168 107 ntBASIC15.09■□□□□ 0.01
Trim62Q80V85 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.09■□□□□ 0.01
Trim62Q80V85 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.09■□□□□ 0.01
Trim62Q80V85 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim62Q80V85 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim62Q80V85 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trim62Q80V85 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim62Q80V85 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim62Q80V85 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim62Q80V85 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Trim62Q80V85 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.09■□□□□ 0.01
Trim62Q80V85 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trim62Q80V85 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim62Q80V85 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trim62Q80V85 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trim62Q80V85 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trim62Q80V85 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim62Q80V85 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trim62Q80V85 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Trim62Q80V85 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.08■□□□□ 0.01
Trim62Q80V85 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim62Q80V85 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim62Q80V85 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim62Q80V85 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trim62Q80V85 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim62Q80V85 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Trim62Q80V85 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim62Q80V85 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Trim62Q80V85 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim62Q80V85 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.08■□□□□ 0
Trim62Q80V85 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim62Q80V85 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Trim62Q80V85 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.08■□□□□ 0
Trim62Q80V85 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.08■□□□□ 0
Trim62Q80V85 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trim62Q80V85 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms