Protein–RNA interactions for Protein: Q7TNM2

Trim46, Tripartite motif-containing protein 46, mousemouse

Predictions only

Length 759 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim46Q7TNM2 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim46Q7TNM2 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim46Q7TNM2 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim46Q7TNM2 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.72□□□□□ -0.21
Trim46Q7TNM2 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trim46Q7TNM2 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trim46Q7TNM2 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim46Q7TNM2 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim46Q7TNM2 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim46Q7TNM2 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim46Q7TNM2 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trim46Q7TNM2 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim46Q7TNM2 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim46Q7TNM2 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim46Q7TNM2 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.72□□□□□ -0.21
Trim46Q7TNM2 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim46Q7TNM2 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim46Q7TNM2 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim46Q7TNM2 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim46Q7TNM2 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trim46Q7TNM2 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim46Q7TNM2 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim46Q7TNM2 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim46Q7TNM2 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim46Q7TNM2 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim46Q7TNM2 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.71□□□□□ -0.21
Trim46Q7TNM2 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim46Q7TNM2 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim46Q7TNM2 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trim46Q7TNM2 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.71□□□□□ -0.21
Trim46Q7TNM2 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim46Q7TNM2 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.71□□□□□ -0.21
Trim46Q7TNM2 Gm12260-201ENSMUST00000122447 411 ntBASIC13.71□□□□□ -0.21
Trim46Q7TNM2 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.71□□□□□ -0.21
Trim46Q7TNM2 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
Trim46Q7TNM2 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trim46Q7TNM2 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.71□□□□□ -0.21
Trim46Q7TNM2 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim46Q7TNM2 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim46Q7TNM2 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim46Q7TNM2 Olfr286-202ENSMUST00000205305 969 ntBASIC13.71□□□□□ -0.21
Trim46Q7TNM2 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim46Q7TNM2 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.71□□□□□ -0.21
Trim46Q7TNM2 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim46Q7TNM2 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trim46Q7TNM2 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim46Q7TNM2 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trim46Q7TNM2 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim46Q7TNM2 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim46Q7TNM2 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim46Q7TNM2 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trim46Q7TNM2 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim46Q7TNM2 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim46Q7TNM2 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Trim46Q7TNM2 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trim46Q7TNM2 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC13.71□□□□□ -0.22
Trim46Q7TNM2 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim46Q7TNM2 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim46Q7TNM2 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Trim46Q7TNM2 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim46Q7TNM2 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim46Q7TNM2 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim46Q7TNM2 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Trim46Q7TNM2 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.7□□□□□ -0.22
Trim46Q7TNM2 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Trim46Q7TNM2 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.7□□□□□ -0.22
Trim46Q7TNM2 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.7□□□□□ -0.22
Trim46Q7TNM2 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.7□□□□□ -0.22
Trim46Q7TNM2 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.7□□□□□ -0.22
Trim46Q7TNM2 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.7□□□□□ -0.22
Trim46Q7TNM2 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trim46Q7TNM2 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim46Q7TNM2 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim46Q7TNM2 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim46Q7TNM2 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.7□□□□□ -0.22
Trim46Q7TNM2 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim46Q7TNM2 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim46Q7TNM2 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Trim46Q7TNM2 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim46Q7TNM2 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim46Q7TNM2 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim46Q7TNM2 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim46Q7TNM2 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim46Q7TNM2 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim46Q7TNM2 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim46Q7TNM2 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim46Q7TNM2 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim46Q7TNM2 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim46Q7TNM2 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim46Q7TNM2 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim46Q7TNM2 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim46Q7TNM2 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim46Q7TNM2 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trim46Q7TNM2 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim46Q7TNM2 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim46Q7TNM2 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim46Q7TNM2 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Trim46Q7TNM2 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim46Q7TNM2 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trim46Q7TNM2 Mir3113-201ENSMUST00000175478 76 ntBASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms