Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx4Q7TNK1 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx4Q7TNK1 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rfx4Q7TNK1 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx4Q7TNK1 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rfx4Q7TNK1 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx4Q7TNK1 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx4Q7TNK1 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx4Q7TNK1 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.03□□□□□ -0.16
Rfx4Q7TNK1 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx4Q7TNK1 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx4Q7TNK1 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rfx4Q7TNK1 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.03□□□□□ -0.16
Rfx4Q7TNK1 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx4Q7TNK1 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rfx4Q7TNK1 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx4Q7TNK1 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.03□□□□□ -0.16
Rfx4Q7TNK1 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Rfx4Q7TNK1 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx4Q7TNK1 AC121577.1-201ENSMUST00000227302 707 ntBASIC14.03□□□□□ -0.16
Rfx4Q7TNK1 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx4Q7TNK1 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx4Q7TNK1 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx4Q7TNK1 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx4Q7TNK1 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx4Q7TNK1 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx4Q7TNK1 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx4Q7TNK1 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx4Q7TNK1 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx4Q7TNK1 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx4Q7TNK1 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx4Q7TNK1 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx4Q7TNK1 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx4Q7TNK1 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx4Q7TNK1 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx4Q7TNK1 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx4Q7TNK1 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rfx4Q7TNK1 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfx4Q7TNK1 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.02□□□□□ -0.16
Rfx4Q7TNK1 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfx4Q7TNK1 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.02□□□□□ -0.16
Rfx4Q7TNK1 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfx4Q7TNK1 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.02□□□□□ -0.16
Rfx4Q7TNK1 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfx4Q7TNK1 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.02□□□□□ -0.16
Rfx4Q7TNK1 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfx4Q7TNK1 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfx4Q7TNK1 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfx4Q7TNK1 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.02□□□□□ -0.17
Rfx4Q7TNK1 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfx4Q7TNK1 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Rfx4Q7TNK1 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfx4Q7TNK1 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.02□□□□□ -0.17
Rfx4Q7TNK1 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfx4Q7TNK1 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.02□□□□□ -0.17
Rfx4Q7TNK1 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Rfx4Q7TNK1 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.02□□□□□ -0.17
Rfx4Q7TNK1 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfx4Q7TNK1 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rfx4Q7TNK1 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfx4Q7TNK1 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfx4Q7TNK1 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rfx4Q7TNK1 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.02□□□□□ -0.17
Rfx4Q7TNK1 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Rfx4Q7TNK1 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfx4Q7TNK1 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rfx4Q7TNK1 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rfx4Q7TNK1 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.01□□□□□ -0.17
Rfx4Q7TNK1 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx4Q7TNK1 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.01□□□□□ -0.17
Rfx4Q7TNK1 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx4Q7TNK1 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx4Q7TNK1 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rfx4Q7TNK1 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx4Q7TNK1 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rfx4Q7TNK1 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rfx4Q7TNK1 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx4Q7TNK1 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx4Q7TNK1 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx4Q7TNK1 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx4Q7TNK1 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx4Q7TNK1 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx4Q7TNK1 Gm23634-201ENSMUST00000175071 91 ntBASIC14.01□□□□□ -0.17
Rfx4Q7TNK1 Mir7071-201ENSMUST00000184847 69 ntBASIC14.01□□□□□ -0.17
Rfx4Q7TNK1 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx4Q7TNK1 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx4Q7TNK1 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx4Q7TNK1 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx4Q7TNK1 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx4Q7TNK1 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx4Q7TNK1 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx4Q7TNK1 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Rfx4Q7TNK1 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx4Q7TNK1 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.01□□□□□ -0.17
Rfx4Q7TNK1 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx4Q7TNK1 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Rfx4Q7TNK1 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx4Q7TNK1 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Rfx4Q7TNK1 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx4Q7TNK1 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms