Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn4bQ7M729 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Scn4bQ7M729 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn4bQ7M729 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Scn4bQ7M729 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.23□□□□□ -0.13
Scn4bQ7M729 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn4bQ7M729 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.23□□□□□ -0.13
Scn4bQ7M729 Gm5264-201ENSMUST00000190584 848 ntBASIC14.23□□□□□ -0.13
Scn4bQ7M729 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.23□□□□□ -0.13
Scn4bQ7M729 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.23□□□□□ -0.13
Scn4bQ7M729 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.23□□□□□ -0.13
Scn4bQ7M729 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn4bQ7M729 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn4bQ7M729 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn4bQ7M729 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn4bQ7M729 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn4bQ7M729 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn4bQ7M729 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scn4bQ7M729 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Scn4bQ7M729 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scn4bQ7M729 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Scn4bQ7M729 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.23□□□□□ -0.13
Scn4bQ7M729 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn4bQ7M729 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scn4bQ7M729 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scn4bQ7M729 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Scn4bQ7M729 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Scn4bQ7M729 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn4bQ7M729 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Scn4bQ7M729 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Scn4bQ7M729 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn4bQ7M729 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn4bQ7M729 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn4bQ7M729 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Scn4bQ7M729 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn4bQ7M729 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn4bQ7M729 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn4bQ7M729 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn4bQ7M729 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn4bQ7M729 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn4bQ7M729 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn4bQ7M729 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Scn4bQ7M729 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.22□□□□□ -0.13
Scn4bQ7M729 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.22□□□□□ -0.13
Scn4bQ7M729 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.22□□□□□ -0.13
Scn4bQ7M729 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn4bQ7M729 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Scn4bQ7M729 Mir3113-201ENSMUST00000175478 76 ntBASIC14.22□□□□□ -0.13
Scn4bQ7M729 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.22□□□□□ -0.13
Scn4bQ7M729 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.22□□□□□ -0.13
Scn4bQ7M729 Gm2451-201ENSMUST00000199447 999 ntBASIC14.22□□□□□ -0.13
Scn4bQ7M729 Gm10290-201ENSMUST00000200451 999 ntBASIC14.22□□□□□ -0.13
Scn4bQ7M729 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn4bQ7M729 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn4bQ7M729 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn4bQ7M729 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn4bQ7M729 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn4bQ7M729 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn4bQ7M729 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.22□□□□□ -0.13
Scn4bQ7M729 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.22□□□□□ -0.13
Scn4bQ7M729 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.22□□□□□ -0.13
Scn4bQ7M729 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn4bQ7M729 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn4bQ7M729 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Scn4bQ7M729 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn4bQ7M729 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn4bQ7M729 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn4bQ7M729 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn4bQ7M729 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn4bQ7M729 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn4bQ7M729 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn4bQ7M729 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Scn4bQ7M729 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn4bQ7M729 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Scn4bQ7M729 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn4bQ7M729 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn4bQ7M729 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn4bQ7M729 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Scn4bQ7M729 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Scn4bQ7M729 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn4bQ7M729 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn4bQ7M729 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn4bQ7M729 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn4bQ7M729 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.21□□□□□ -0.13
Scn4bQ7M729 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn4bQ7M729 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn4bQ7M729 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn4bQ7M729 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn4bQ7M729 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.21□□□□□ -0.13
Scn4bQ7M729 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.21□□□□□ -0.13
Scn4bQ7M729 Gm14494-201ENSMUST00000118786 435 ntBASIC14.21□□□□□ -0.13
Scn4bQ7M729 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.21□□□□□ -0.13
Scn4bQ7M729 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn4bQ7M729 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.21□□□□□ -0.13
Scn4bQ7M729 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn4bQ7M729 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn4bQ7M729 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn4bQ7M729 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn4bQ7M729 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn4bQ7M729 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms