Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Dhx40Q6PE54 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Dhx40Q6PE54 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Dhx40Q6PE54 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Dhx40Q6PE54 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Dhx40Q6PE54 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Dhx40Q6PE54 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Dhx40Q6PE54 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Dhx40Q6PE54 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Dhx40Q6PE54 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Dhx40Q6PE54 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Dhx40Q6PE54 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Dhx40Q6PE54 Gm37411-201ENSMUST00000194180 2282 ntBASIC16.21■□□□□ 0.19
Dhx40Q6PE54 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Dhx40Q6PE54 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Dhx40Q6PE54 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Dhx40Q6PE54 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Dhx40Q6PE54 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Dhx40Q6PE54 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Dhx40Q6PE54 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Dhx40Q6PE54 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Dhx40Q6PE54 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Dhx40Q6PE54 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.21■□□□□ 0.19
Dhx40Q6PE54 Gm11764-201ENSMUST00000120221 623 ntBASIC16.21■□□□□ 0.19
Dhx40Q6PE54 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Dhx40Q6PE54 Gm4899-201ENSMUST00000178708 719 ntBASIC16.21■□□□□ 0.19
Dhx40Q6PE54 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Dhx40Q6PE54 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Dhx40Q6PE54 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.21■□□□□ 0.19
Dhx40Q6PE54 Gm7787-201ENSMUST00000216858 688 ntBASIC16.21■□□□□ 0.19
Dhx40Q6PE54 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Dhx40Q6PE54 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Dhx40Q6PE54 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC16.21■□□□□ 0.19
Dhx40Q6PE54 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
Dhx40Q6PE54 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Dhx40Q6PE54 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Dhx40Q6PE54 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC16.21■□□□□ 0.18
Dhx40Q6PE54 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Dhx40Q6PE54 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Dhx40Q6PE54 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Dhx40Q6PE54 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Dhx40Q6PE54 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Dhx40Q6PE54 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Dhx40Q6PE54 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC16.2■□□□□ 0.18
Dhx40Q6PE54 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC16.2■□□□□ 0.18
Dhx40Q6PE54 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.2■□□□□ 0.18
Dhx40Q6PE54 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Dhx40Q6PE54 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Dhx40Q6PE54 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.2■□□□□ 0.18
Dhx40Q6PE54 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Dhx40Q6PE54 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Dhx40Q6PE54 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Dhx40Q6PE54 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Dhx40Q6PE54 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Dhx40Q6PE54 Gm7222-201ENSMUST00000117512 906 ntBASIC16.2■□□□□ 0.18
Dhx40Q6PE54 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Dhx40Q6PE54 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Dhx40Q6PE54 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Dhx40Q6PE54 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Dhx40Q6PE54 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.2■□□□□ 0.18
Dhx40Q6PE54 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC16.2■□□□□ 0.18
Dhx40Q6PE54 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Dhx40Q6PE54 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Dhx40Q6PE54 Mmp14-206ENSMUST00000225641 3238 ntBASIC16.2■□□□□ 0.18
Dhx40Q6PE54 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Dhx40Q6PE54 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Dhx40Q6PE54 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Dhx40Q6PE54 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Dhx40Q6PE54 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Dhx40Q6PE54 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Dhx40Q6PE54 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Dhx40Q6PE54 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Dhx40Q6PE54 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Dhx40Q6PE54 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Dhx40Q6PE54 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Dhx40Q6PE54 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Dhx40Q6PE54 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Dhx40Q6PE54 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Dhx40Q6PE54 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Dhx40Q6PE54 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Dhx40Q6PE54 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC16.19■□□□□ 0.18
Dhx40Q6PE54 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Dhx40Q6PE54 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Dhx40Q6PE54 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Dhx40Q6PE54 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Dhx40Q6PE54 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Dhx40Q6PE54 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Dhx40Q6PE54 Gm4691-201ENSMUST00000182339 1000 ntBASIC16.19■□□□□ 0.18
Dhx40Q6PE54 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.19■□□□□ 0.18
Dhx40Q6PE54 Gm2451-201ENSMUST00000199447 999 ntBASIC16.19■□□□□ 0.18
Dhx40Q6PE54 Gm10290-201ENSMUST00000200451 999 ntBASIC16.19■□□□□ 0.18
Dhx40Q6PE54 Olfr286-202ENSMUST00000205305 969 ntBASIC16.19■□□□□ 0.18
Dhx40Q6PE54 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Dhx40Q6PE54 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Dhx40Q6PE54 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Dhx40Q6PE54 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Dhx40Q6PE54 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Dhx40Q6PE54 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Dhx40Q6PE54 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Dhx40Q6PE54 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms