Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chd4Q6PDQ2 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chd4Q6PDQ2 Gm37714-201ENSMUST00000194742 342 ntBASIC18.77■□□□□ 0.6
Chd4Q6PDQ2 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC18.77■□□□□ 0.6
Chd4Q6PDQ2 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chd4Q6PDQ2 Gm9899-201ENSMUST00000065519 555 ntBASIC18.77■□□□□ 0.6
Chd4Q6PDQ2 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chd4Q6PDQ2 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chd4Q6PDQ2 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chd4Q6PDQ2 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chd4Q6PDQ2 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chd4Q6PDQ2 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chd4Q6PDQ2 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Chd4Q6PDQ2 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Chd4Q6PDQ2 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Chd4Q6PDQ2 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Chd4Q6PDQ2 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Chd4Q6PDQ2 Ighv1-51-201ENSMUST00000192903 354 ntBASIC18.76■□□□□ 0.59
Chd4Q6PDQ2 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC18.76■□□□□ 0.59
Chd4Q6PDQ2 Gm37748-201ENSMUST00000194379 1140 ntBASIC18.76■□□□□ 0.59
Chd4Q6PDQ2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.76■□□□□ 0.59
Chd4Q6PDQ2 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.76■□□□□ 0.59
Chd4Q6PDQ2 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC18.76■□□□□ 0.59
Chd4Q6PDQ2 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chd4Q6PDQ2 Gm10584-201ENSMUST00000207036 2628 ntBASIC18.76■□□□□ 0.59
Chd4Q6PDQ2 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Chd4Q6PDQ2 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Chd4Q6PDQ2 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chd4Q6PDQ2 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chd4Q6PDQ2 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chd4Q6PDQ2 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chd4Q6PDQ2 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chd4Q6PDQ2 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Chd4Q6PDQ2 Gm13829-201ENSMUST00000119600 138 ntBASIC18.76■□□□□ 0.59
Chd4Q6PDQ2 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chd4Q6PDQ2 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC18.76■□□□□ 0.59
Chd4Q6PDQ2 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC18.76■□□□□ 0.59
Chd4Q6PDQ2 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chd4Q6PDQ2 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chd4Q6PDQ2 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.76■□□□□ 0.59
Chd4Q6PDQ2 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chd4Q6PDQ2 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chd4Q6PDQ2 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC18.75■□□□□ 0.59
Chd4Q6PDQ2 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chd4Q6PDQ2 Gm28911-201ENSMUST00000188837 117 ntBASIC18.75■□□□□ 0.59
Chd4Q6PDQ2 Gm6007-201ENSMUST00000208170 823 ntBASIC18.75■□□□□ 0.59
Chd4Q6PDQ2 AC153962.4-201ENSMUST00000217878 242 ntBASIC18.75■□□□□ 0.59
Chd4Q6PDQ2 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Chd4Q6PDQ2 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chd4Q6PDQ2 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chd4Q6PDQ2 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chd4Q6PDQ2 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Chd4Q6PDQ2 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chd4Q6PDQ2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.75■□□□□ 0.59
Chd4Q6PDQ2 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chd4Q6PDQ2 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC18.75■□□□□ 0.59
Chd4Q6PDQ2 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chd4Q6PDQ2 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC18.74■□□□□ 0.59
Chd4Q6PDQ2 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chd4Q6PDQ2 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chd4Q6PDQ2 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC18.74■□□□□ 0.59
Chd4Q6PDQ2 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC18.74■□□□□ 0.59
Chd4Q6PDQ2 Gm6983-201ENSMUST00000214912 628 ntBASIC18.74■□□□□ 0.59
Chd4Q6PDQ2 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chd4Q6PDQ2 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chd4Q6PDQ2 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chd4Q6PDQ2 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Chd4Q6PDQ2 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Chd4Q6PDQ2 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chd4Q6PDQ2 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chd4Q6PDQ2 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC18.74■□□□□ 0.59
Chd4Q6PDQ2 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Chd4Q6PDQ2 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC18.74■□□□□ 0.59
Chd4Q6PDQ2 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC18.74■□□□□ 0.59
Chd4Q6PDQ2 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC18.74■□□□□ 0.59
Chd4Q6PDQ2 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chd4Q6PDQ2 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chd4Q6PDQ2 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Chd4Q6PDQ2 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chd4Q6PDQ2 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chd4Q6PDQ2 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chd4Q6PDQ2 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC18.73■□□□□ 0.59
Chd4Q6PDQ2 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Chd4Q6PDQ2 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Chd4Q6PDQ2 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chd4Q6PDQ2 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chd4Q6PDQ2 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chd4Q6PDQ2 Gm13385-201ENSMUST00000121089 220 ntBASIC18.73■□□□□ 0.59
Chd4Q6PDQ2 Gm6244-201ENSMUST00000178732 841 ntBASIC18.73■□□□□ 0.59
Chd4Q6PDQ2 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Chd4Q6PDQ2 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Chd4Q6PDQ2 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chd4Q6PDQ2 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chd4Q6PDQ2 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Chd4Q6PDQ2 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chd4Q6PDQ2 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chd4Q6PDQ2 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chd4Q6PDQ2 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chd4Q6PDQ2 AC161252.3-201ENSMUST00000225465 1549 ntBASIC18.73■□□□□ 0.59
Chd4Q6PDQ2 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms