Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhga7Q6DD96 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Pcdhga7Q6DD96 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Pcdhga7Q6DD96 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhga7Q6DD96 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhga7Q6DD96 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhga7Q6DD96 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhga7Q6DD96 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Pcdhga7Q6DD96 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.21□□□□□ -0.13
Pcdhga7Q6DD96 Gm13036-201ENSMUST00000117799 748 ntBASIC14.21□□□□□ -0.13
Pcdhga7Q6DD96 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.21□□□□□ -0.13
Pcdhga7Q6DD96 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhga7Q6DD96 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.21□□□□□ -0.13
Pcdhga7Q6DD96 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.21□□□□□ -0.13
Pcdhga7Q6DD96 AC153961.1-201ENSMUST00000217760 385 ntBASIC14.21□□□□□ -0.13
Pcdhga7Q6DD96 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.21□□□□□ -0.13
Pcdhga7Q6DD96 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhga7Q6DD96 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhga7Q6DD96 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.21□□□□□ -0.13
Pcdhga7Q6DD96 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Pcdhga7Q6DD96 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhga7Q6DD96 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhga7Q6DD96 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhga7Q6DD96 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhga7Q6DD96 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhga7Q6DD96 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhga7Q6DD96 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhga7Q6DD96 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhga7Q6DD96 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
Pcdhga7Q6DD96 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhga7Q6DD96 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Pcdhga7Q6DD96 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhga7Q6DD96 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhga7Q6DD96 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdhga7Q6DD96 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga7Q6DD96 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdhga7Q6DD96 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga7Q6DD96 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga7Q6DD96 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga7Q6DD96 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga7Q6DD96 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga7Q6DD96 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga7Q6DD96 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga7Q6DD96 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga7Q6DD96 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga7Q6DD96 Gm13884-201ENSMUST00000118103 829 ntBASIC14.2□□□□□ -0.14
Pcdhga7Q6DD96 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.2□□□□□ -0.14
Pcdhga7Q6DD96 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga7Q6DD96 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdhga7Q6DD96 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pcdhga7Q6DD96 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga7Q6DD96 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.2□□□□□ -0.14
Pcdhga7Q6DD96 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga7Q6DD96 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pcdhga7Q6DD96 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Pcdhga7Q6DD96 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga7Q6DD96 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga7Q6DD96 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga7Q6DD96 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga7Q6DD96 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga7Q6DD96 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga7Q6DD96 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga7Q6DD96 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
Pcdhga7Q6DD96 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga7Q6DD96 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga7Q6DD96 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga7Q6DD96 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Pcdhga7Q6DD96 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Pcdhga7Q6DD96 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga7Q6DD96 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga7Q6DD96 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga7Q6DD96 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga7Q6DD96 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga7Q6DD96 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga7Q6DD96 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga7Q6DD96 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdhga7Q6DD96 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga7Q6DD96 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga7Q6DD96 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.19□□□□□ -0.14
Pcdhga7Q6DD96 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga7Q6DD96 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga7Q6DD96 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdhga7Q6DD96 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga7Q6DD96 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdhga7Q6DD96 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga7Q6DD96 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga7Q6DD96 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Pcdhga7Q6DD96 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.19□□□□□ -0.14
Pcdhga7Q6DD96 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga7Q6DD96 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdhga7Q6DD96 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga7Q6DD96 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga7Q6DD96 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga7Q6DD96 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga7Q6DD96 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga7Q6DD96 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga7Q6DD96 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga7Q6DD96 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga7Q6DD96 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga7Q6DD96 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms