Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Sdc3Q64519 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.06□□□□□ -0.16
Sdc3Q64519 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc3Q64519 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Sdc3Q64519 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.06□□□□□ -0.16
Sdc3Q64519 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.06□□□□□ -0.16
Sdc3Q64519 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.06□□□□□ -0.16
Sdc3Q64519 Gm5312-201ENSMUST00000203728 547 ntBASIC14.06□□□□□ -0.16
Sdc3Q64519 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.06□□□□□ -0.16
Sdc3Q64519 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.06□□□□□ -0.16
Sdc3Q64519 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc3Q64519 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc3Q64519 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Sdc3Q64519 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc3Q64519 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Sdc3Q64519 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc3Q64519 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc3Q64519 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc3Q64519 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc3Q64519 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc3Q64519 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc3Q64519 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc3Q64519 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc3Q64519 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc3Q64519 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Sdc3Q64519 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc3Q64519 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc3Q64519 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Sdc3Q64519 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc3Q64519 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc3Q64519 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc3Q64519 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.05□□□□□ -0.16
Sdc3Q64519 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc3Q64519 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Sdc3Q64519 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc3Q64519 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc3Q64519 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc3Q64519 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc3Q64519 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc3Q64519 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc3Q64519 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.05□□□□□ -0.16
Sdc3Q64519 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc3Q64519 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc3Q64519 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc3Q64519 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc3Q64519 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Sdc3Q64519 Gm13616-201ENSMUST00000120600 222 ntBASIC14.05□□□□□ -0.16
Sdc3Q64519 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc3Q64519 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.05□□□□□ -0.16
Sdc3Q64519 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc3Q64519 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc3Q64519 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Sdc3Q64519 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc3Q64519 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Sdc3Q64519 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.05□□□□□ -0.16
Sdc3Q64519 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc3Q64519 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc3Q64519 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc3Q64519 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc3Q64519 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc3Q64519 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Sdc3Q64519 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc3Q64519 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc3Q64519 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sdc3Q64519 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sdc3Q64519 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.04□□□□□ -0.16
Sdc3Q64519 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sdc3Q64519 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sdc3Q64519 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sdc3Q64519 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sdc3Q64519 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sdc3Q64519 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sdc3Q64519 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Sdc3Q64519 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.04□□□□□ -0.16
Sdc3Q64519 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sdc3Q64519 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sdc3Q64519 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sdc3Q64519 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.04□□□□□ -0.16
Sdc3Q64519 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sdc3Q64519 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sdc3Q64519 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.04□□□□□ -0.16
Sdc3Q64519 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sdc3Q64519 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sdc3Q64519 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sdc3Q64519 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sdc3Q64519 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sdc3Q64519 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sdc3Q64519 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Sdc3Q64519 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sdc3Q64519 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sdc3Q64519 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sdc3Q64519 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sdc3Q64519 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sdc3Q64519 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sdc3Q64519 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sdc3Q64519 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Sdc3Q64519 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sdc3Q64519 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Sdc3Q64519 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sdc3Q64519 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms