Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clcn1Q64347 Gm45133-201ENSMUST00000207548 2773 ntBASIC18.46■□□□□ 0.55
Clcn1Q64347 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clcn1Q64347 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Clcn1Q64347 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Clcn1Q64347 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clcn1Q64347 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clcn1Q64347 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Clcn1Q64347 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Clcn1Q64347 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clcn1Q64347 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC18.45■□□□□ 0.54
Clcn1Q64347 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC18.45■□□□□ 0.54
Clcn1Q64347 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clcn1Q64347 Gm4691-201ENSMUST00000182339 1000 ntBASIC18.45■□□□□ 0.54
Clcn1Q64347 Gm2451-201ENSMUST00000199447 999 ntBASIC18.45■□□□□ 0.54
Clcn1Q64347 Gm10290-201ENSMUST00000200451 999 ntBASIC18.45■□□□□ 0.54
Clcn1Q64347 Gm45059-201ENSMUST00000205558 1077 ntBASIC18.45■□□□□ 0.54
Clcn1Q64347 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC18.45■□□□□ 0.54
Clcn1Q64347 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clcn1Q64347 Gm20445-201ENSMUST00000061905 565 ntBASIC18.45■□□□□ 0.54
Clcn1Q64347 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clcn1Q64347 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clcn1Q64347 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clcn1Q64347 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
Clcn1Q64347 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clcn1Q64347 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clcn1Q64347 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clcn1Q64347 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clcn1Q64347 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC18.45■□□□□ 0.54
Clcn1Q64347 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clcn1Q64347 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clcn1Q64347 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Clcn1Q64347 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Clcn1Q64347 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Clcn1Q64347 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Clcn1Q64347 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clcn1Q64347 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Clcn1Q64347 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Clcn1Q64347 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clcn1Q64347 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Clcn1Q64347 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clcn1Q64347 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clcn1Q64347 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clcn1Q64347 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Clcn1Q64347 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Clcn1Q64347 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Clcn1Q64347 Gm22189-201ENSMUST00000103822 86 ntBASIC18.44■□□□□ 0.54
Clcn1Q64347 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Clcn1Q64347 Gm6222-201ENSMUST00000120787 396 ntBASIC18.44■□□□□ 0.54
Clcn1Q64347 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Clcn1Q64347 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC18.44■□□□□ 0.54
Clcn1Q64347 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Clcn1Q64347 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clcn1Q64347 AC154239.3-201ENSMUST00000226933 674 ntBASIC18.44■□□□□ 0.54
Clcn1Q64347 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clcn1Q64347 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Clcn1Q64347 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clcn1Q64347 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC18.44■□□□□ 0.54
Clcn1Q64347 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Clcn1Q64347 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clcn1Q64347 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn1Q64347 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn1Q64347 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn1Q64347 Gm5049-201ENSMUST00000195878 1590 ntBASIC18.43■□□□□ 0.54
Clcn1Q64347 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Clcn1Q64347 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn1Q64347 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn1Q64347 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Clcn1Q64347 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
Clcn1Q64347 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn1Q64347 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn1Q64347 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn1Q64347 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn1Q64347 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Clcn1Q64347 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn1Q64347 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn1Q64347 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn1Q64347 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn1Q64347 Gm9908-201ENSMUST00000211534 448 ntBASIC18.43■□□□□ 0.54
Clcn1Q64347 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn1Q64347 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn1Q64347 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn1Q64347 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn1Q64347 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn1Q64347 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn1Q64347 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn1Q64347 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn1Q64347 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn1Q64347 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn1Q64347 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn1Q64347 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn1Q64347 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn1Q64347 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn1Q64347 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn1Q64347 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Clcn1Q64347 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn1Q64347 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn1Q64347 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Clcn1Q64347 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn1Q64347 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms