Protein–RNA interactions for Protein: Q61510

Trim25, E3 ubiquitin/ISG15 ligase TRIM25, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim25Q61510 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim25Q61510 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trim25Q61510 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Trim25Q61510 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim25Q61510 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.82■□□□□ 0.12
Trim25Q61510 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC15.82■□□□□ 0.12
Trim25Q61510 Gm45328-201ENSMUST00000210942 917 ntBASIC15.82■□□□□ 0.12
Trim25Q61510 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim25Q61510 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim25Q61510 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim25Q61510 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim25Q61510 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim25Q61510 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim25Q61510 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim25Q61510 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim25Q61510 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim25Q61510 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trim25Q61510 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim25Q61510 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim25Q61510 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trim25Q61510 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trim25Q61510 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim25Q61510 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim25Q61510 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim25Q61510 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Trim25Q61510 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Trim25Q61510 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim25Q61510 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.81■□□□□ 0.12
Trim25Q61510 Rprl3-201ENSMUST00000157400 290 ntBASIC15.81■□□□□ 0.12
Trim25Q61510 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim25Q61510 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim25Q61510 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim25Q61510 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim25Q61510 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim25Q61510 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim25Q61510 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim25Q61510 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.81■□□□□ 0.12
Trim25Q61510 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim25Q61510 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim25Q61510 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim25Q61510 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim25Q61510 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim25Q61510 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trim25Q61510 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim25Q61510 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim25Q61510 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim25Q61510 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim25Q61510 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim25Q61510 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC15.81■□□□□ 0.12
Trim25Q61510 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim25Q61510 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim25Q61510 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim25Q61510 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.8■□□□□ 0.12
Trim25Q61510 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim25Q61510 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim25Q61510 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim25Q61510 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim25Q61510 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15.8■□□□□ 0.12
Trim25Q61510 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Trim25Q61510 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC15.8■□□□□ 0.12
Trim25Q61510 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim25Q61510 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trim25Q61510 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim25Q61510 Gm25745-201ENSMUST00000174945 133 ntBASIC15.8■□□□□ 0.12
Trim25Q61510 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.8■□□□□ 0.12
Trim25Q61510 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim25Q61510 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.8■□□□□ 0.12
Trim25Q61510 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim25Q61510 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim25Q61510 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim25Q61510 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trim25Q61510 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trim25Q61510 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.8■□□□□ 0.12
Trim25Q61510 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim25Q61510 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim25Q61510 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim25Q61510 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.8■□□□□ 0.12
Trim25Q61510 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trim25Q61510 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim25Q61510 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC15.8■□□□□ 0.12
Trim25Q61510 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.8■□□□□ 0.12
Trim25Q61510 Ntrk2-208ENSMUST00000225583 2719 ntBASIC15.8■□□□□ 0.12
Trim25Q61510 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim25Q61510 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trim25Q61510 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim25Q61510 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim25Q61510 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim25Q61510 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim25Q61510 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim25Q61510 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim25Q61510 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim25Q61510 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Trim25Q61510 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim25Q61510 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim25Q61510 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim25Q61510 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim25Q61510 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim25Q61510 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim25Q61510 Gm4459-201ENSMUST00000118750 468 ntBASIC15.79■□□□□ 0.12
Trim25Q61510 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms