Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Gm28423-201ENSMUST00000190701 696 ntBASIC15.21■□□□□ 0.03
Smarcd1Q61466 Gm21899-201ENSMUST00000190745 696 ntBASIC15.21■□□□□ 0.03
Smarcd1Q61466 Gm21910-201ENSMUST00000191163 696 ntBASIC15.21■□□□□ 0.03
Smarcd1Q61466 Gm21849-201ENSMUST00000191571 696 ntBASIC15.21■□□□□ 0.03
Smarcd1Q61466 Gm28678-201ENSMUST00000191593 696 ntBASIC15.21■□□□□ 0.03
Smarcd1Q61466 Gm20910-201ENSMUST00000193268 696 ntBASIC15.21■□□□□ 0.03
Smarcd1Q61466 Gm21871-201ENSMUST00000194621 696 ntBASIC15.21■□□□□ 0.03
Smarcd1Q61466 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.21■□□□□ 0.03
Smarcd1Q61466 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.21■□□□□ 0.03
Smarcd1Q61466 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcd1Q61466 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcd1Q61466 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Smarcd1Q61466 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcd1Q61466 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcd1Q61466 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.21■□□□□ 0.03
Smarcd1Q61466 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcd1Q61466 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Smarcd1Q61466 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Smarcd1Q61466 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
Smarcd1Q61466 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Smarcd1Q61466 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Smarcd1Q61466 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Smarcd1Q61466 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.02
Smarcd1Q61466 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd1Q61466 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd1Q61466 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd1Q61466 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd1Q61466 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd1Q61466 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd1Q61466 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd1Q61466 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd1Q61466 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd1Q61466 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd1Q61466 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd1Q61466 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd1Q61466 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd1Q61466 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd1Q61466 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.2■□□□□ 0.02
Smarcd1Q61466 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.2■□□□□ 0.02
Smarcd1Q61466 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.2■□□□□ 0.02
Smarcd1Q61466 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.2■□□□□ 0.02
Smarcd1Q61466 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd1Q61466 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd1Q61466 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd1Q61466 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd1Q61466 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd1Q61466 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd1Q61466 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Smarcd1Q61466 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Smarcd1Q61466 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd1Q61466 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd1Q61466 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd1Q61466 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd1Q61466 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd1Q61466 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd1Q61466 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Smarcd1Q61466 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd1Q61466 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd1Q61466 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.19■□□□□ 0.02
Smarcd1Q61466 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd1Q61466 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Smarcd1Q61466 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd1Q61466 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Smarcd1Q61466 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.19■□□□□ 0.02
Smarcd1Q61466 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.19■□□□□ 0.02
Smarcd1Q61466 Gm9719-201ENSMUST00000162765 543 ntBASIC15.19■□□□□ 0.02
Smarcd1Q61466 Auts2-212ENSMUST00000178555 309 ntBASIC15.19■□□□□ 0.02
Smarcd1Q61466 Gm25144-201ENSMUST00000179561 110 ntBASIC15.19■□□□□ 0.02
Smarcd1Q61466 Gm25352-201ENSMUST00000179815 110 ntBASIC15.19■□□□□ 0.02
Smarcd1Q61466 Gm28630-201ENSMUST00000187806 498 ntBASIC15.19■□□□□ 0.02
Smarcd1Q61466 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.19■□□□□ 0.02
Smarcd1Q61466 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.19■□□□□ 0.02
Smarcd1Q61466 Gm10576-201ENSMUST00000191927 825 ntBASIC15.19■□□□□ 0.02
Smarcd1Q61466 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.19■□□□□ 0.02
Smarcd1Q61466 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd1Q61466 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd1Q61466 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd1Q61466 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Smarcd1Q61466 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Smarcd1Q61466 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd1Q61466 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd1Q61466 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd1Q61466 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd1Q61466 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd1Q61466 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd1Q61466 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd1Q61466 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Smarcd1Q61466 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd1Q61466 Carlr-201ENSMUST00000181515 2574 ntBASIC15.19■□□□□ 0.02
Smarcd1Q61466 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Smarcd1Q61466 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcd1Q61466 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcd1Q61466 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.18■□□□□ 0.02
Smarcd1Q61466 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcd1Q61466 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcd1Q61466 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.18■□□□□ 0.02
Smarcd1Q61466 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcd1Q61466 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcd1Q61466 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC15.18■□□□□ 0.02
Smarcd1Q61466 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms