Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vsx2Q61412 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vsx2Q61412 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vsx2Q61412 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.26□□□□□ -0.13
Vsx2Q61412 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.26□□□□□ -0.13
Vsx2Q61412 Gm16198-201ENSMUST00000118766 670 ntBASIC14.26□□□□□ -0.13
Vsx2Q61412 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.26□□□□□ -0.13
Vsx2Q61412 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vsx2Q61412 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.26□□□□□ -0.13
Vsx2Q61412 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.26□□□□□ -0.13
Vsx2Q61412 Gm10154-201ENSMUST00000084445 354 ntBASIC14.26□□□□□ -0.13
Vsx2Q61412 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vsx2Q61412 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vsx2Q61412 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.26□□□□□ -0.13
Vsx2Q61412 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vsx2Q61412 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vsx2Q61412 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vsx2Q61412 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Vsx2Q61412 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.26□□□□□ -0.13
Vsx2Q61412 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vsx2Q61412 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vsx2Q61412 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vsx2Q61412 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx2Q61412 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Vsx2Q61412 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx2Q61412 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx2Q61412 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Vsx2Q61412 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Vsx2Q61412 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx2Q61412 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Vsx2Q61412 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Vsx2Q61412 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx2Q61412 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx2Q61412 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx2Q61412 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx2Q61412 Celf4-206ENSMUST00000224553 1729 ntBASIC14.25□□□□□ -0.13
Vsx2Q61412 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Vsx2Q61412 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Vsx2Q61412 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx2Q61412 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx2Q61412 Gm15427-201ENSMUST00000117288 531 ntBASIC14.25□□□□□ -0.13
Vsx2Q61412 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.25□□□□□ -0.13
Vsx2Q61412 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.25□□□□□ -0.13
Vsx2Q61412 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.25□□□□□ -0.13
Vsx2Q61412 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx2Q61412 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx2Q61412 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Vsx2Q61412 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx2Q61412 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx2Q61412 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx2Q61412 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Vsx2Q61412 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx2Q61412 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx2Q61412 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Vsx2Q61412 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx2Q61412 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx2Q61412 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx2Q61412 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx2Q61412 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vsx2Q61412 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vsx2Q61412 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vsx2Q61412 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vsx2Q61412 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vsx2Q61412 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vsx2Q61412 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vsx2Q61412 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vsx2Q61412 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vsx2Q61412 Gm9385-201ENSMUST00000117563 472 ntBASIC14.24□□□□□ -0.13
Vsx2Q61412 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vsx2Q61412 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.24□□□□□ -0.13
Vsx2Q61412 Gm2272-201ENSMUST00000194903 582 ntBASIC14.24□□□□□ -0.13
Vsx2Q61412 Gm43575-201ENSMUST00000196420 516 ntBASIC14.24□□□□□ -0.13
Vsx2Q61412 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Vsx2Q61412 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vsx2Q61412 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vsx2Q61412 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vsx2Q61412 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vsx2Q61412 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vsx2Q61412 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Vsx2Q61412 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vsx2Q61412 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Vsx2Q61412 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vsx2Q61412 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.24□□□□□ -0.13
Vsx2Q61412 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Vsx2Q61412 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vsx2Q61412 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vsx2Q61412 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.24□□□□□ -0.13
Vsx2Q61412 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.24□□□□□ -0.13
Vsx2Q61412 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vsx2Q61412 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vsx2Q61412 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vsx2Q61412 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vsx2Q61412 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.23□□□□□ -0.13
Vsx2Q61412 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vsx2Q61412 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vsx2Q61412 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vsx2Q61412 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vsx2Q61412 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vsx2Q61412 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.23□□□□□ -0.13
Vsx2Q61412 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms