Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Six4Q61321 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.73□□□□□ -0.05
Six4Q61321 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Six4Q61321 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Six4Q61321 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Six4Q61321 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Six4Q61321 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Six4Q61321 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Six4Q61321 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Six4Q61321 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Six4Q61321 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Six4Q61321 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Six4Q61321 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Six4Q61321 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Six4Q61321 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Six4Q61321 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Six4Q61321 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Six4Q61321 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Six4Q61321 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Six4Q61321 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Six4Q61321 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Six4Q61321 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Six4Q61321 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Six4Q61321 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.72□□□□□ -0.05
Six4Q61321 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Six4Q61321 Gm12134-201ENSMUST00000122109 520 ntBASIC14.72□□□□□ -0.05
Six4Q61321 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Six4Q61321 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.72□□□□□ -0.05
Six4Q61321 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.72□□□□□ -0.05
Six4Q61321 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Six4Q61321 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Six4Q61321 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Six4Q61321 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Six4Q61321 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Six4Q61321 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Six4Q61321 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
Six4Q61321 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.72□□□□□ -0.05
Six4Q61321 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Six4Q61321 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Six4Q61321 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Six4Q61321 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Six4Q61321 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Six4Q61321 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Six4Q61321 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.71□□□□□ -0.05
Six4Q61321 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.71□□□□□ -0.05
Six4Q61321 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.71□□□□□ -0.05
Six4Q61321 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.71□□□□□ -0.05
Six4Q61321 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Six4Q61321 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Six4Q61321 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Six4Q61321 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Six4Q61321 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Six4Q61321 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.71□□□□□ -0.05
Six4Q61321 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.71□□□□□ -0.05
Six4Q61321 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Six4Q61321 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Six4Q61321 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Six4Q61321 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Six4Q61321 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Six4Q61321 Gm25287-201ENSMUST00000103846 110 ntBASIC14.71□□□□□ -0.05
Six4Q61321 Gm22918-201ENSMUST00000103855 110 ntBASIC14.71□□□□□ -0.05
Six4Q61321 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.71□□□□□ -0.05
Six4Q61321 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Six4Q61321 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.71□□□□□ -0.05
Six4Q61321 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Six4Q61321 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.71□□□□□ -0.05
Six4Q61321 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Six4Q61321 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Six4Q61321 Gm5867-201ENSMUST00000063197 592 ntBASIC14.71□□□□□ -0.05
Six4Q61321 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Six4Q61321 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Six4Q61321 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.71□□□□□ -0.05
Six4Q61321 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.71□□□□□ -0.05
Six4Q61321 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Six4Q61321 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Six4Q61321 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Six4Q61321 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.71□□□□□ -0.06
Six4Q61321 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.71□□□□□ -0.06
Six4Q61321 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Six4Q61321 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.71□□□□□ -0.06
Six4Q61321 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Six4Q61321 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Six4Q61321 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Six4Q61321 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Six4Q61321 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Six4Q61321 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Six4Q61321 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Six4Q61321 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Six4Q61321 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Six4Q61321 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Six4Q61321 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.7□□□□□ -0.06
Six4Q61321 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Six4Q61321 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Six4Q61321 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Six4Q61321 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.7□□□□□ -0.06
Six4Q61321 Gm22065-201ENSMUST00000103753 110 ntBASIC14.7□□□□□ -0.06
Six4Q61321 Gm22066-201ENSMUST00000103761 110 ntBASIC14.7□□□□□ -0.06
Six4Q61321 Gm24932-201ENSMUST00000103763 110 ntBASIC14.7□□□□□ -0.06
Six4Q61321 Gm24115-201ENSMUST00000103799 110 ntBASIC14.7□□□□□ -0.06
Six4Q61321 Gm22190-201ENSMUST00000103827 110 ntBASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms