Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps54Q5SPW0 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps54Q5SPW0 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps54Q5SPW0 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps54Q5SPW0 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Vps54Q5SPW0 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps54Q5SPW0 Gm43509-201ENSMUST00000196551 2594 ntBASIC17.52■□□□□ 0.4
Vps54Q5SPW0 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps54Q5SPW0 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps54Q5SPW0 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps54Q5SPW0 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps54Q5SPW0 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps54Q5SPW0 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Vps54Q5SPW0 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps54Q5SPW0 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps54Q5SPW0 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC17.52■□□□□ 0.4
Vps54Q5SPW0 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Vps54Q5SPW0 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Vps54Q5SPW0 AC124732.2-201ENSMUST00000221977 316 ntBASIC17.52■□□□□ 0.4
Vps54Q5SPW0 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Vps54Q5SPW0 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps54Q5SPW0 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Vps54Q5SPW0 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps54Q5SPW0 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.52■□□□□ 0.39
Vps54Q5SPW0 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Vps54Q5SPW0 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vps54Q5SPW0 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vps54Q5SPW0 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Vps54Q5SPW0 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vps54Q5SPW0 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Vps54Q5SPW0 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.52■□□□□ 0.39
Vps54Q5SPW0 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Vps54Q5SPW0 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Vps54Q5SPW0 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps54Q5SPW0 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps54Q5SPW0 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC17.51■□□□□ 0.39
Vps54Q5SPW0 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.51■□□□□ 0.39
Vps54Q5SPW0 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vps54Q5SPW0 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Vps54Q5SPW0 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vps54Q5SPW0 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC17.51■□□□□ 0.39
Vps54Q5SPW0 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC17.51■□□□□ 0.39
Vps54Q5SPW0 Gm25925-201ENSMUST00000158314 306 ntBASIC17.51■□□□□ 0.39
Vps54Q5SPW0 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps54Q5SPW0 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC17.51■□□□□ 0.39
Vps54Q5SPW0 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vps54Q5SPW0 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC17.51■□□□□ 0.39
Vps54Q5SPW0 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps54Q5SPW0 Rbfox2-208ENSMUST00000227930 1218 ntBASIC17.51■□□□□ 0.39
Vps54Q5SPW0 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps54Q5SPW0 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps54Q5SPW0 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vps54Q5SPW0 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps54Q5SPW0 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps54Q5SPW0 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Vps54Q5SPW0 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps54Q5SPW0 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC17.51■□□□□ 0.39
Vps54Q5SPW0 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps54Q5SPW0 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps54Q5SPW0 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps54Q5SPW0 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Vps54Q5SPW0 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps54Q5SPW0 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
Vps54Q5SPW0 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Vps54Q5SPW0 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Vps54Q5SPW0 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps54Q5SPW0 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps54Q5SPW0 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Vps54Q5SPW0 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Vps54Q5SPW0 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps54Q5SPW0 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Vps54Q5SPW0 Gm6539-201ENSMUST00000119157 1064 ntBASIC17.5■□□□□ 0.39
Vps54Q5SPW0 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Vps54Q5SPW0 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Vps54Q5SPW0 Gm27618-201ENSMUST00000183671 60 ntBASIC17.5■□□□□ 0.39
Vps54Q5SPW0 Gm29310-201ENSMUST00000185468 696 ntBASIC17.5■□□□□ 0.39
Vps54Q5SPW0 Gm21825-201ENSMUST00000185728 696 ntBASIC17.5■□□□□ 0.39
Vps54Q5SPW0 Gm29109-201ENSMUST00000185895 696 ntBASIC17.5■□□□□ 0.39
Vps54Q5SPW0 Gm21896-201ENSMUST00000186520 696 ntBASIC17.5■□□□□ 0.39
Vps54Q5SPW0 Gm21873-201ENSMUST00000186728 696 ntBASIC17.5■□□□□ 0.39
Vps54Q5SPW0 Gm21794-201ENSMUST00000187056 696 ntBASIC17.5■□□□□ 0.39
Vps54Q5SPW0 Gm21880-201ENSMUST00000187275 696 ntBASIC17.5■□□□□ 0.39
Vps54Q5SPW0 Gm21826-201ENSMUST00000187451 696 ntBASIC17.5■□□□□ 0.39
Vps54Q5SPW0 Gm21198-201ENSMUST00000188393 696 ntBASIC17.5■□□□□ 0.39
Vps54Q5SPW0 Gm21749-201ENSMUST00000189343 696 ntBASIC17.5■□□□□ 0.39
Vps54Q5SPW0 Gm21901-201ENSMUST00000189568 696 ntBASIC17.5■□□□□ 0.39
Vps54Q5SPW0 Gm29424-201ENSMUST00000189716 696 ntBASIC17.5■□□□□ 0.39
Vps54Q5SPW0 Gm28599-201ENSMUST00000189838 694 ntBASIC17.5■□□□□ 0.39
Vps54Q5SPW0 Gm21867-201ENSMUST00000189917 696 ntBASIC17.5■□□□□ 0.39
Vps54Q5SPW0 Gm29269-201ENSMUST00000190087 696 ntBASIC17.5■□□□□ 0.39
Vps54Q5SPW0 Gm21722-201ENSMUST00000190153 696 ntBASIC17.5■□□□□ 0.39
Vps54Q5SPW0 Gm28423-201ENSMUST00000190701 696 ntBASIC17.5■□□□□ 0.39
Vps54Q5SPW0 Gm21899-201ENSMUST00000190745 696 ntBASIC17.5■□□□□ 0.39
Vps54Q5SPW0 Gm21910-201ENSMUST00000191163 696 ntBASIC17.5■□□□□ 0.39
Vps54Q5SPW0 Gm21849-201ENSMUST00000191571 696 ntBASIC17.5■□□□□ 0.39
Vps54Q5SPW0 Gm28678-201ENSMUST00000191593 696 ntBASIC17.5■□□□□ 0.39
Vps54Q5SPW0 Gm20910-201ENSMUST00000193268 696 ntBASIC17.5■□□□□ 0.39
Vps54Q5SPW0 Gm21871-201ENSMUST00000194621 696 ntBASIC17.5■□□□□ 0.39
Vps54Q5SPW0 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC17.5■□□□□ 0.39
Vps54Q5SPW0 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms