Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC11.38□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.38□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC11.37□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Gm27867-201ENSMUST00000184778 125 ntBASIC11.37□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 AC108846.1-201ENSMUST00000214531 513 ntBASIC11.37□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC11.37□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC11.36□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.36□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.36□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC11.36□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Olfr129-201ENSMUST00000122318 993 ntBASIC11.36□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Gm27742-201ENSMUST00000184667 60 ntBASIC11.36□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 AC155729.1-201ENSMUST00000227758 544 ntBASIC11.36□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Matn2-206ENSMUST00000228570 2798 ntBASIC11.36□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.36□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC11.36□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms