Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf20Q5DTM8 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf20Q5DTM8 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf20Q5DTM8 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf20Q5DTM8 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Rnf20Q5DTM8 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf20Q5DTM8 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Rnf20Q5DTM8 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Rnf20Q5DTM8 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.39■□□□□ 0.37
Rnf20Q5DTM8 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf20Q5DTM8 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf20Q5DTM8 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Rnf20Q5DTM8 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf20Q5DTM8 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf20Q5DTM8 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Rnf20Q5DTM8 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Rnf20Q5DTM8 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf20Q5DTM8 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf20Q5DTM8 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf20Q5DTM8 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf20Q5DTM8 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf20Q5DTM8 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf20Q5DTM8 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf20Q5DTM8 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf20Q5DTM8 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf20Q5DTM8 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Rnf20Q5DTM8 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf20Q5DTM8 Gm15467-201ENSMUST00000120582 445 ntBASIC17.38■□□□□ 0.37
Rnf20Q5DTM8 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Rnf20Q5DTM8 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf20Q5DTM8 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.38■□□□□ 0.37
Rnf20Q5DTM8 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf20Q5DTM8 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf20Q5DTM8 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf20Q5DTM8 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Rnf20Q5DTM8 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf20Q5DTM8 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf20Q5DTM8 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf20Q5DTM8 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Rnf20Q5DTM8 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf20Q5DTM8 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf20Q5DTM8 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf20Q5DTM8 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf20Q5DTM8 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Rnf20Q5DTM8 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf20Q5DTM8 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf20Q5DTM8 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf20Q5DTM8 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf20Q5DTM8 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf20Q5DTM8 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC17.37■□□□□ 0.37
Rnf20Q5DTM8 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf20Q5DTM8 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf20Q5DTM8 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Rnf20Q5DTM8 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf20Q5DTM8 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf20Q5DTM8 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf20Q5DTM8 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf20Q5DTM8 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17.37■□□□□ 0.37
Rnf20Q5DTM8 Rpph1-201ENSMUST00000175096 319 ntBASIC17.37■□□□□ 0.37
Rnf20Q5DTM8 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.37■□□□□ 0.37
Rnf20Q5DTM8 Gm6443-201ENSMUST00000203599 874 ntBASIC17.37■□□□□ 0.37
Rnf20Q5DTM8 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf20Q5DTM8 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf20Q5DTM8 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Rnf20Q5DTM8 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf20Q5DTM8 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf20Q5DTM8 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.37■□□□□ 0.37
Rnf20Q5DTM8 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf20Q5DTM8 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Rnf20Q5DTM8 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf20Q5DTM8 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Rnf20Q5DTM8 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Rnf20Q5DTM8 Gm14451-201ENSMUST00000121581 1542 ntBASIC17.37■□□□□ 0.37
Rnf20Q5DTM8 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf20Q5DTM8 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf20Q5DTM8 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Rnf20Q5DTM8 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf20Q5DTM8 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.36■□□□□ 0.37
Rnf20Q5DTM8 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf20Q5DTM8 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf20Q5DTM8 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf20Q5DTM8 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf20Q5DTM8 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Rnf20Q5DTM8 Gm11779-201ENSMUST00000118541 368 ntBASIC17.36■□□□□ 0.37
Rnf20Q5DTM8 Gm45098-201ENSMUST00000207179 657 ntBASIC17.36■□□□□ 0.37
Rnf20Q5DTM8 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.36■□□□□ 0.37
Rnf20Q5DTM8 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Rnf20Q5DTM8 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf20Q5DTM8 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf20Q5DTM8 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Rnf20Q5DTM8 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf20Q5DTM8 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.36■□□□□ 0.37
Rnf20Q5DTM8 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf20Q5DTM8 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Rnf20Q5DTM8 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf20Q5DTM8 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Rnf20Q5DTM8 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf20Q5DTM8 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf20Q5DTM8 Gm10676-201ENSMUST00000098778 3221 ntBASIC17.36■□□□□ 0.37
Rnf20Q5DTM8 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms