Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Shd-206ENSMUST00000225145 998 ntBASIC14.17□□□□□ -0.14
Rnf223Q3UV31 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.17□□□□□ -0.14
Rnf223Q3UV31 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf223Q3UV31 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf223Q3UV31 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.17□□□□□ -0.14
Rnf223Q3UV31 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf223Q3UV31 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf223Q3UV31 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf223Q3UV31 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Rnf223Q3UV31 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf223Q3UV31 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf223Q3UV31 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf223Q3UV31 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf223Q3UV31 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rnf223Q3UV31 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf223Q3UV31 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rnf223Q3UV31 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf223Q3UV31 Gm38116-201ENSMUST00000193873 1533 ntBASIC14.16□□□□□ -0.14
Rnf223Q3UV31 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf223Q3UV31 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf223Q3UV31 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.16□□□□□ -0.14
Rnf223Q3UV31 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Rnf223Q3UV31 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf223Q3UV31 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rnf223Q3UV31 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf223Q3UV31 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf223Q3UV31 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf223Q3UV31 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.16□□□□□ -0.14
Rnf223Q3UV31 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf223Q3UV31 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf223Q3UV31 Gm27631-201ENSMUST00000184163 466 ntBASIC14.16□□□□□ -0.14
Rnf223Q3UV31 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf223Q3UV31 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf223Q3UV31 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf223Q3UV31 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf223Q3UV31 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf223Q3UV31 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf223Q3UV31 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf223Q3UV31 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rnf223Q3UV31 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf223Q3UV31 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf223Q3UV31 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf223Q3UV31 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rnf223Q3UV31 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf223Q3UV31 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf223Q3UV31 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf223Q3UV31 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf223Q3UV31 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf223Q3UV31 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.15□□□□□ -0.14
Rnf223Q3UV31 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.15□□□□□ -0.14
Rnf223Q3UV31 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf223Q3UV31 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.15□□□□□ -0.14
Rnf223Q3UV31 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.15□□□□□ -0.14
Rnf223Q3UV31 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf223Q3UV31 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rnf223Q3UV31 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf223Q3UV31 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf223Q3UV31 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rnf223Q3UV31 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf223Q3UV31 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf223Q3UV31 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf223Q3UV31 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf223Q3UV31 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf223Q3UV31 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.15□□□□□ -0.14
Rnf223Q3UV31 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.15□□□□□ -0.14
Rnf223Q3UV31 Gm14767-201ENSMUST00000121559 586 ntBASIC14.15□□□□□ -0.14
Rnf223Q3UV31 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.15□□□□□ -0.14
Rnf223Q3UV31 Gm27680-201ENSMUST00000184192 160 ntBASIC14.15□□□□□ -0.14
Rnf223Q3UV31 Gm44344-201ENSMUST00000200287 129 ntBASIC14.15□□□□□ -0.14
Rnf223Q3UV31 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.15□□□□□ -0.14
Rnf223Q3UV31 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf223Q3UV31 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf223Q3UV31 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf223Q3UV31 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf223Q3UV31 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf223Q3UV31 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rnf223Q3UV31 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf223Q3UV31 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf223Q3UV31 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf223Q3UV31 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf223Q3UV31 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Rnf223Q3UV31 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rnf223Q3UV31 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf223Q3UV31 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Rnf223Q3UV31 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Rnf223Q3UV31 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf223Q3UV31 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.14□□□□□ -0.15
Rnf223Q3UV31 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf223Q3UV31 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf223Q3UV31 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Rnf223Q3UV31 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Rnf223Q3UV31 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.14□□□□□ -0.15
Rnf223Q3UV31 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf223Q3UV31 Mir1897-201ENSMUST00000122581 272 ntBASIC14.14□□□□□ -0.15
Rnf223Q3UV31 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf223Q3UV31 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf223Q3UV31 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.14□□□□□ -0.15
Rnf223Q3UV31 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf223Q3UV31 Gm9063-201ENSMUST00000223299 582 ntBASIC14.14□□□□□ -0.15
Rnf223Q3UV31 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms