Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lins1Q3U1D0 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lins1Q3U1D0 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lins1Q3U1D0 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lins1Q3U1D0 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Lins1Q3U1D0 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Lins1Q3U1D0 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Lins1Q3U1D0 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lins1Q3U1D0 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Lins1Q3U1D0 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lins1Q3U1D0 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lins1Q3U1D0 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lins1Q3U1D0 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lins1Q3U1D0 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.35■□□□□ 0.37
Lins1Q3U1D0 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Lins1Q3U1D0 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lins1Q3U1D0 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lins1Q3U1D0 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
Lins1Q3U1D0 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lins1Q3U1D0 Gm24543-201ENSMUST00000103867 82 ntBASIC17.34■□□□□ 0.37
Lins1Q3U1D0 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC17.34■□□□□ 0.37
Lins1Q3U1D0 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lins1Q3U1D0 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC17.34■□□□□ 0.37
Lins1Q3U1D0 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Lins1Q3U1D0 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lins1Q3U1D0 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lins1Q3U1D0 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC17.34■□□□□ 0.37
Lins1Q3U1D0 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Lins1Q3U1D0 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Lins1Q3U1D0 Gm43697-201ENSMUST00000199637 2581 ntBASIC17.34■□□□□ 0.37
Lins1Q3U1D0 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Lins1Q3U1D0 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lins1Q3U1D0 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.34■□□□□ 0.37
Lins1Q3U1D0 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.34■□□□□ 0.37
Lins1Q3U1D0 AC140375.2-201ENSMUST00000225283 584 ntBASIC17.34■□□□□ 0.37
Lins1Q3U1D0 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lins1Q3U1D0 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lins1Q3U1D0 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lins1Q3U1D0 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Lins1Q3U1D0 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lins1Q3U1D0 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lins1Q3U1D0 Gm43509-201ENSMUST00000196551 2594 ntBASIC17.34■□□□□ 0.37
Lins1Q3U1D0 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Lins1Q3U1D0 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lins1Q3U1D0 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lins1Q3U1D0 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Lins1Q3U1D0 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lins1Q3U1D0 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.33■□□□□ 0.37
Lins1Q3U1D0 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lins1Q3U1D0 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Lins1Q3U1D0 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Lins1Q3U1D0 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lins1Q3U1D0 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lins1Q3U1D0 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lins1Q3U1D0 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lins1Q3U1D0 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lins1Q3U1D0 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lins1Q3U1D0 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC17.33■□□□□ 0.36
Lins1Q3U1D0 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lins1Q3U1D0 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC17.33■□□□□ 0.36
Lins1Q3U1D0 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC17.33■□□□□ 0.36
Lins1Q3U1D0 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lins1Q3U1D0 Gm6944-201ENSMUST00000182449 1006 ntBASIC17.33■□□□□ 0.36
Lins1Q3U1D0 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC17.33■□□□□ 0.36
Lins1Q3U1D0 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lins1Q3U1D0 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.33■□□□□ 0.36
Lins1Q3U1D0 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Lins1Q3U1D0 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Lins1Q3U1D0 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lins1Q3U1D0 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lins1Q3U1D0 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lins1Q3U1D0 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lins1Q3U1D0 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lins1Q3U1D0 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lins1Q3U1D0 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Lins1Q3U1D0 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lins1Q3U1D0 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Lins1Q3U1D0 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lins1Q3U1D0 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lins1Q3U1D0 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lins1Q3U1D0 Shd-206ENSMUST00000225145 998 ntBASIC17.32■□□□□ 0.36
Lins1Q3U1D0 AC090659.2-201ENSMUST00000225378 1186 ntBASIC17.32■□□□□ 0.36
Lins1Q3U1D0 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lins1Q3U1D0 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.32■□□□□ 0.36
Lins1Q3U1D0 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lins1Q3U1D0 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lins1Q3U1D0 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC17.32■□□□□ 0.36
Lins1Q3U1D0 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lins1Q3U1D0 Gm37297-201ENSMUST00000192974 2384 ntBASIC17.32■□□□□ 0.36
Lins1Q3U1D0 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Lins1Q3U1D0 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lins1Q3U1D0 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lins1Q3U1D0 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lins1Q3U1D0 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lins1Q3U1D0 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lins1Q3U1D0 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lins1Q3U1D0 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lins1Q3U1D0 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Lins1Q3U1D0 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lins1Q3U1D0 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms