Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Fndc4Q3TR08 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Fndc4Q3TR08 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Fndc4Q3TR08 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Fndc4Q3TR08 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Fndc4Q3TR08 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Fndc4Q3TR08 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Fndc4Q3TR08 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Fndc4Q3TR08 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Fndc4Q3TR08 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Fndc4Q3TR08 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.48□□□□□ -0.41
Fndc4Q3TR08 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Fndc4Q3TR08 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Fndc4Q3TR08 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Fndc4Q3TR08 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Fndc4Q3TR08 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Fndc4Q3TR08 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Fndc4Q3TR08 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Fndc4Q3TR08 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Fndc4Q3TR08 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.48□□□□□ -0.41
Fndc4Q3TR08 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Fndc4Q3TR08 Gm13884-201ENSMUST00000118103 829 ntBASIC12.48□□□□□ -0.41
Fndc4Q3TR08 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Fndc4Q3TR08 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Fndc4Q3TR08 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Fndc4Q3TR08 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Fndc4Q3TR08 Gm8318-201ENSMUST00000182954 872 ntBASIC12.48□□□□□ -0.41
Fndc4Q3TR08 Gm27741-201ENSMUST00000185060 237 ntBASIC12.48□□□□□ -0.41
Fndc4Q3TR08 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Fndc4Q3TR08 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Fndc4Q3TR08 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Fndc4Q3TR08 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Fndc4Q3TR08 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Fndc4Q3TR08 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Fndc4Q3TR08 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Fndc4Q3TR08 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Fndc4Q3TR08 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Fndc4Q3TR08 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Fndc4Q3TR08 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Fndc4Q3TR08 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Fndc4Q3TR08 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Fndc4Q3TR08 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.48□□□□□ -0.41
Fndc4Q3TR08 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Fndc4Q3TR08 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.48□□□□□ -0.41
Fndc4Q3TR08 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Fndc4Q3TR08 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Fndc4Q3TR08 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Fndc4Q3TR08 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Fndc4Q3TR08 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Fndc4Q3TR08 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Fndc4Q3TR08 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Fndc4Q3TR08 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Fndc4Q3TR08 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Fndc4Q3TR08 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Fndc4Q3TR08 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Fndc4Q3TR08 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Fndc4Q3TR08 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Fndc4Q3TR08 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.47□□□□□ -0.41
Fndc4Q3TR08 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.47□□□□□ -0.41
Fndc4Q3TR08 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Fndc4Q3TR08 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Fndc4Q3TR08 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Fndc4Q3TR08 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Fndc4Q3TR08 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Fndc4Q3TR08 Gm7862-201ENSMUST00000121461 292 ntBASIC12.47□□□□□ -0.41
Fndc4Q3TR08 Gm11452-201ENSMUST00000122376 690 ntBASIC12.47□□□□□ -0.41
Fndc4Q3TR08 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.47□□□□□ -0.41
Fndc4Q3TR08 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Fndc4Q3TR08 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC12.47□□□□□ -0.41
Fndc4Q3TR08 Gm5864-201ENSMUST00000202263 970 ntBASIC12.47□□□□□ -0.41
Fndc4Q3TR08 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC12.47□□□□□ -0.41
Fndc4Q3TR08 AC159106.1-201ENSMUST00000224421 690 ntBASIC12.47□□□□□ -0.41
Fndc4Q3TR08 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Fndc4Q3TR08 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Fndc4Q3TR08 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Fndc4Q3TR08 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Fndc4Q3TR08 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Fndc4Q3TR08 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Fndc4Q3TR08 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Fndc4Q3TR08 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Fndc4Q3TR08 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Fndc4Q3TR08 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Fndc4Q3TR08 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.47□□□□□ -0.41
Fndc4Q3TR08 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Fndc4Q3TR08 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Fndc4Q3TR08 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Fndc4Q3TR08 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Fndc4Q3TR08 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Fndc4Q3TR08 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Fndc4Q3TR08 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.46□□□□□ -0.41
Fndc4Q3TR08 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.46□□□□□ -0.41
Fndc4Q3TR08 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.46□□□□□ -0.41
Fndc4Q3TR08 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Fndc4Q3TR08 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.46□□□□□ -0.41
Fndc4Q3TR08 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Fndc4Q3TR08 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Fndc4Q3TR08 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Fndc4Q3TR08 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Fndc4Q3TR08 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Fndc4Q3TR08 Gm3928-201ENSMUST00000121141 1307 ntBASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms