Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nhej1Q3KNJ2 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nhej1Q3KNJ2 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nhej1Q3KNJ2 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nhej1Q3KNJ2 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nhej1Q3KNJ2 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nhej1Q3KNJ2 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nhej1Q3KNJ2 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nhej1Q3KNJ2 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.59■□□□□ 0.09
Nhej1Q3KNJ2 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nhej1Q3KNJ2 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC15.59■□□□□ 0.09
Nhej1Q3KNJ2 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Nhej1Q3KNJ2 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Nhej1Q3KNJ2 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.58■□□□□ 0.09
Nhej1Q3KNJ2 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Nhej1Q3KNJ2 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Nhej1Q3KNJ2 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Nhej1Q3KNJ2 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Nhej1Q3KNJ2 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Nhej1Q3KNJ2 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Nhej1Q3KNJ2 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nhej1Q3KNJ2 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Nhej1Q3KNJ2 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nhej1Q3KNJ2 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.58■□□□□ 0.08
Nhej1Q3KNJ2 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nhej1Q3KNJ2 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.08
Nhej1Q3KNJ2 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Nhej1Q3KNJ2 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nhej1Q3KNJ2 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.58■□□□□ 0.08
Nhej1Q3KNJ2 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.58■□□□□ 0.08
Nhej1Q3KNJ2 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nhej1Q3KNJ2 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Nhej1Q3KNJ2 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.58■□□□□ 0.08
Nhej1Q3KNJ2 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
Nhej1Q3KNJ2 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nhej1Q3KNJ2 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nhej1Q3KNJ2 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nhej1Q3KNJ2 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nhej1Q3KNJ2 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nhej1Q3KNJ2 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nhej1Q3KNJ2 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nhej1Q3KNJ2 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.58■□□□□ 0.08
Nhej1Q3KNJ2 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nhej1Q3KNJ2 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nhej1Q3KNJ2 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Nhej1Q3KNJ2 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nhej1Q3KNJ2 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nhej1Q3KNJ2 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Nhej1Q3KNJ2 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Nhej1Q3KNJ2 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Nhej1Q3KNJ2 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nhej1Q3KNJ2 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Nhej1Q3KNJ2 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nhej1Q3KNJ2 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Nhej1Q3KNJ2 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nhej1Q3KNJ2 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nhej1Q3KNJ2 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.57■□□□□ 0.08
Nhej1Q3KNJ2 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Nhej1Q3KNJ2 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Nhej1Q3KNJ2 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.57■□□□□ 0.08
Nhej1Q3KNJ2 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Nhej1Q3KNJ2 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nhej1Q3KNJ2 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nhej1Q3KNJ2 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nhej1Q3KNJ2 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nhej1Q3KNJ2 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nhej1Q3KNJ2 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nhej1Q3KNJ2 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Nhej1Q3KNJ2 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nhej1Q3KNJ2 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Nhej1Q3KNJ2 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC15.57■□□□□ 0.08
Nhej1Q3KNJ2 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nhej1Q3KNJ2 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nhej1Q3KNJ2 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Nhej1Q3KNJ2 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Nhej1Q3KNJ2 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC15.56■□□□□ 0.08
Nhej1Q3KNJ2 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Nhej1Q3KNJ2 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Nhej1Q3KNJ2 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Nhej1Q3KNJ2 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.56■□□□□ 0.08
Nhej1Q3KNJ2 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.56■□□□□ 0.08
Nhej1Q3KNJ2 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.56■□□□□ 0.08
Nhej1Q3KNJ2 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.56■□□□□ 0.08
Nhej1Q3KNJ2 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nhej1Q3KNJ2 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nhej1Q3KNJ2 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.56■□□□□ 0.08
Nhej1Q3KNJ2 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Nhej1Q3KNJ2 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.56■□□□□ 0.08
Nhej1Q3KNJ2 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nhej1Q3KNJ2 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Nhej1Q3KNJ2 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.56■□□□□ 0.08
Nhej1Q3KNJ2 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Nhej1Q3KNJ2 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nhej1Q3KNJ2 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
Nhej1Q3KNJ2 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Nhej1Q3KNJ2 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nhej1Q3KNJ2 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nhej1Q3KNJ2 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nhej1Q3KNJ2 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Nhej1Q3KNJ2 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms