Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ush2AQ2QI47 Gm44729-201ENSMUST00000206759 2052 ntBASIC7.58□□□□□ -1.2
Ush2AQ2QI47 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ush2AQ2QI47 Gm38327-201ENSMUST00000195852 1755 ntBASIC7.58□□□□□ -1.2
Ush2AQ2QI47 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ush2AQ2QI47 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ush2AQ2QI47 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ush2AQ2QI47 Gm4760-201ENSMUST00000119663 1030 ntBASIC7.58□□□□□ -1.2
Ush2AQ2QI47 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ush2AQ2QI47 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC7.58□□□□□ -1.2
Ush2AQ2QI47 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC7.58□□□□□ -1.2
Ush2AQ2QI47 AC163667.3-201ENSMUST00000225774 222 ntBASIC7.58□□□□□ -1.2
Ush2AQ2QI47 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ush2AQ2QI47 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ush2AQ2QI47 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ush2AQ2QI47 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC7.58□□□□□ -1.2
Ush2AQ2QI47 Gm37015-201ENSMUST00000192763 1521 ntBASIC7.58□□□□□ -1.2
Ush2AQ2QI47 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Ush2AQ2QI47 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ush2AQ2QI47 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ush2AQ2QI47 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ush2AQ2QI47 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
Ush2AQ2QI47 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ush2AQ2QI47 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ush2AQ2QI47 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC7.58□□□□□ -1.2
Ush2AQ2QI47 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ush2AQ2QI47 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Ush2AQ2QI47 Gm13045-201ENSMUST00000119019 712 ntBASIC7.58□□□□□ -1.2
Ush2AQ2QI47 Gm38317-201ENSMUST00000195564 343 ntBASIC7.58□□□□□ -1.2
Ush2AQ2QI47 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC7.58□□□□□ -1.2
Ush2AQ2QI47 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ush2AQ2QI47 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Ush2AQ2QI47 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ush2AQ2QI47 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC7.58□□□□□ -1.2
Ush2AQ2QI47 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ush2AQ2QI47 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ush2AQ2QI47 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ush2AQ2QI47 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ush2AQ2QI47 Gm19459-201ENSMUST00000176240 835 ntBASIC7.58□□□□□ -1.2
Ush2AQ2QI47 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ush2AQ2QI47 Itm2b-204ENSMUST00000228637 783 ntBASIC7.58□□□□□ -1.2
Ush2AQ2QI47 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ush2AQ2QI47 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ush2AQ2QI47 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ush2AQ2QI47 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC7.58□□□□□ -1.2
Ush2AQ2QI47 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Gm43778-201ENSMUST00000199438 199 ntBASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC7.57□□□□□ -1.2
Ush2AQ2QI47 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 AC135469.1-201ENSMUST00000225984 772 ntBASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Gm8385-201ENSMUST00000058999 643 ntBASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms