Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.37□□□□□ -0.11
Sox4Q06831 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sox4Q06831 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.37□□□□□ -0.11
Sox4Q06831 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox4Q06831 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.37□□□□□ -0.11
Sox4Q06831 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox4Q06831 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.37□□□□□ -0.11
Sox4Q06831 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox4Q06831 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
Sox4Q06831 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox4Q06831 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.37□□□□□ -0.11
Sox4Q06831 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox4Q06831 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Sox4Q06831 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox4Q06831 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox4Q06831 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox4Q06831 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.37□□□□□ -0.11
Sox4Q06831 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox4Q06831 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox4Q06831 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.37□□□□□ -0.11
Sox4Q06831 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox4Q06831 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sox4Q06831 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox4Q06831 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox4Q06831 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox4Q06831 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox4Q06831 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox4Q06831 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox4Q06831 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox4Q06831 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.36□□□□□ -0.11
Sox4Q06831 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox4Q06831 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox4Q06831 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox4Q06831 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox4Q06831 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox4Q06831 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox4Q06831 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox4Q06831 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.36□□□□□ -0.11
Sox4Q06831 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Sox4Q06831 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox4Q06831 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox4Q06831 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Sox4Q06831 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.36□□□□□ -0.11
Sox4Q06831 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.36□□□□□ -0.11
Sox4Q06831 Gm24158-201ENSMUST00000175263 71 ntBASIC14.36□□□□□ -0.11
Sox4Q06831 Gm7774-201ENSMUST00000200064 533 ntBASIC14.36□□□□□ -0.11
Sox4Q06831 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.36□□□□□ -0.11
Sox4Q06831 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox4Q06831 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.36□□□□□ -0.11
Sox4Q06831 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Sox4Q06831 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox4Q06831 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox4Q06831 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox4Q06831 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox4Q06831 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox4Q06831 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox4Q06831 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox4Q06831 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox4Q06831 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sox4Q06831 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox4Q06831 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sox4Q06831 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox4Q06831 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox4Q06831 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox4Q06831 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox4Q06831 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox4Q06831 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox4Q06831 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox4Q06831 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox4Q06831 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox4Q06831 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox4Q06831 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox4Q06831 Mir449b-201ENSMUST00000104833 80 ntBASIC14.35□□□□□ -0.11
Sox4Q06831 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sox4Q06831 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sox4Q06831 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sox4Q06831 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox4Q06831 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox4Q06831 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox4Q06831 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox4Q06831 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Sox4Q06831 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.35□□□□□ -0.11
Sox4Q06831 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox4Q06831 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox4Q06831 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Sox4Q06831 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox4Q06831 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Sox4Q06831 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox4Q06831 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox4Q06831 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.34□□□□□ -0.11
Sox4Q06831 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox4Q06831 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox4Q06831 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox4Q06831 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox4Q06831 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox4Q06831 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.34□□□□□ -0.11
Sox4Q06831 Gm13015-201ENSMUST00000118674 204 ntBASIC14.34□□□□□ -0.11
Sox4Q06831 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.34□□□□□ -0.11
Sox4Q06831 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.34□□□□□ -0.11
Sox4Q06831 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms