Protein–RNA interactions for Protein: P97390

Vps45, Vacuolar protein sorting-associated protein 45, mousemouse

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps45P97390 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps45P97390 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vps45P97390 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Vps45P97390 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Vps45P97390 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.1■□□□□ 0.01
Vps45P97390 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vps45P97390 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps45P97390 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Vps45P97390 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps45P97390 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Vps45P97390 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.1■□□□□ 0.01
Vps45P97390 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps45P97390 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps45P97390 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Vps45P97390 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps45P97390 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.09■□□□□ 0.01
Vps45P97390 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps45P97390 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Vps45P97390 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Vps45P97390 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps45P97390 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps45P97390 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps45P97390 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps45P97390 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps45P97390 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.09■□□□□ 0.01
Vps45P97390 Gm24158-201ENSMUST00000175263 71 ntBASIC15.09■□□□□ 0.01
Vps45P97390 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Vps45P97390 Gm27437-201ENSMUST00000183429 107 ntBASIC15.09■□□□□ 0.01
Vps45P97390 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.09■□□□□ 0.01
Vps45P97390 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps45P97390 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps45P97390 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps45P97390 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.09■□□□□ 0.01
Vps45P97390 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Vps45P97390 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.09■□□□□ 0.01
Vps45P97390 AC159621.2-201ENSMUST00000223519 1326 ntBASIC15.09■□□□□ 0.01
Vps45P97390 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps45P97390 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Vps45P97390 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps45P97390 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps45P97390 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps45P97390 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps45P97390 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps45P97390 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Vps45P97390 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Vps45P97390 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.08■□□□□ 0.01
Vps45P97390 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Vps45P97390 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Vps45P97390 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Vps45P97390 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Vps45P97390 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.08■□□□□ 0
Vps45P97390 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vps45P97390 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Vps45P97390 Gm22065-201ENSMUST00000103753 110 ntBASIC15.08■□□□□ 0
Vps45P97390 Gm22066-201ENSMUST00000103761 110 ntBASIC15.08■□□□□ 0
Vps45P97390 Gm24932-201ENSMUST00000103763 110 ntBASIC15.08■□□□□ 0
Vps45P97390 Gm24115-201ENSMUST00000103799 110 ntBASIC15.08■□□□□ 0
Vps45P97390 Gm22190-201ENSMUST00000103827 110 ntBASIC15.08■□□□□ 0
Vps45P97390 Gm22191-201ENSMUST00000103831 110 ntBASIC15.08■□□□□ 0
Vps45P97390 Gm24721-201ENSMUST00000103849 110 ntBASIC15.08■□□□□ 0
Vps45P97390 Gm28018-201ENSMUST00000103869 110 ntBASIC15.08■□□□□ 0
Vps45P97390 Gm26399-201ENSMUST00000103937 110 ntBASIC15.08■□□□□ 0
Vps45P97390 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Vps45P97390 Gm13464-201ENSMUST00000119418 935 ntBASIC15.08■□□□□ 0
Vps45P97390 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC15.08■□□□□ 0
Vps45P97390 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Vps45P97390 Gm25349-201ENSMUST00000177728 110 ntBASIC15.08■□□□□ 0
Vps45P97390 Gm23616-201ENSMUST00000177797 110 ntBASIC15.08■□□□□ 0
Vps45P97390 Gm25871-201ENSMUST00000177816 110 ntBASIC15.08■□□□□ 0
Vps45P97390 Gm24752-201ENSMUST00000178240 110 ntBASIC15.08■□□□□ 0
Vps45P97390 Gm24496-201ENSMUST00000178287 110 ntBASIC15.08■□□□□ 0
Vps45P97390 Gm25649-201ENSMUST00000178476 110 ntBASIC15.08■□□□□ 0
Vps45P97390 Gm25548-201ENSMUST00000178681 110 ntBASIC15.08■□□□□ 0
Vps45P97390 Gm23147-201ENSMUST00000178841 110 ntBASIC15.08■□□□□ 0
Vps45P97390 Gm26095-201ENSMUST00000179270 110 ntBASIC15.08■□□□□ 0
Vps45P97390 Gm22171-201ENSMUST00000179283 110 ntBASIC15.08■□□□□ 0
Vps45P97390 Gm23936-201ENSMUST00000179354 110 ntBASIC15.08■□□□□ 0
Vps45P97390 Gm22619-201ENSMUST00000179516 110 ntBASIC15.08■□□□□ 0
Vps45P97390 Gm25255-201ENSMUST00000179579 110 ntBASIC15.08■□□□□ 0
Vps45P97390 Gm24755-201ENSMUST00000179691 110 ntBASIC15.08■□□□□ 0
Vps45P97390 Gm26506-201ENSMUST00000179692 110 ntBASIC15.08■□□□□ 0
Vps45P97390 Gm25086-201ENSMUST00000179931 110 ntBASIC15.08■□□□□ 0
Vps45P97390 Gm23243-201ENSMUST00000180047 110 ntBASIC15.08■□□□□ 0
Vps45P97390 Gm24659-201ENSMUST00000180212 110 ntBASIC15.08■□□□□ 0
Vps45P97390 Gm24169-201ENSMUST00000180244 110 ntBASIC15.08■□□□□ 0
Vps45P97390 Gm23689-201ENSMUST00000180354 110 ntBASIC15.08■□□□□ 0
Vps45P97390 Gm27359-201ENSMUST00000184153 110 ntBASIC15.08■□□□□ 0
Vps45P97390 Gm27785-201ENSMUST00000184268 110 ntBASIC15.08■□□□□ 0
Vps45P97390 Gm27466-201ENSMUST00000184396 110 ntBASIC15.08■□□□□ 0
Vps45P97390 Gm27703-201ENSMUST00000184836 110 ntBASIC15.08■□□□□ 0
Vps45P97390 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.08■□□□□ 0
Vps45P97390 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC15.08■□□□□ 0
Vps45P97390 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.08■□□□□ 0
Vps45P97390 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vps45P97390 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vps45P97390 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vps45P97390 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vps45P97390 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Vps45P97390 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vps45P97390 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms