Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx2-3P97334 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.26■□□□□ 0.51
Nkx2-3P97334 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC18.26■□□□□ 0.51
Nkx2-3P97334 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx2-3P97334 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC18.26■□□□□ 0.51
Nkx2-3P97334 Gm43433-201ENSMUST00000196573 481 ntBASIC18.26■□□□□ 0.51
Nkx2-3P97334 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC18.26■□□□□ 0.51
Nkx2-3P97334 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC18.26■□□□□ 0.51
Nkx2-3P97334 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Nkx2-3P97334 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx2-3P97334 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx2-3P97334 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx2-3P97334 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx2-3P97334 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx2-3P97334 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Nkx2-3P97334 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx2-3P97334 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx2-3P97334 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx2-3P97334 AC154527.2-201ENSMUST00000225256 1466 ntBASIC18.26■□□□□ 0.51
Nkx2-3P97334 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx2-3P97334 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx2-3P97334 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx2-3P97334 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx2-3P97334 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx2-3P97334 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.25■□□□□ 0.51
Nkx2-3P97334 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx2-3P97334 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx2-3P97334 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC18.25■□□□□ 0.51
Nkx2-3P97334 Gm12341-201ENSMUST00000119724 503 ntBASIC18.25■□□□□ 0.51
Nkx2-3P97334 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC18.25■□□□□ 0.51
Nkx2-3P97334 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx2-3P97334 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC18.25■□□□□ 0.51
Nkx2-3P97334 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx2-3P97334 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx2-3P97334 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx2-3P97334 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC18.25■□□□□ 0.51
Nkx2-3P97334 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx2-3P97334 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx2-3P97334 Camk2g-217ENSMUST00000226630 1937 ntBASIC18.25■□□□□ 0.51
Nkx2-3P97334 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.24■□□□□ 0.51
Nkx2-3P97334 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nkx2-3P97334 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.24■□□□□ 0.51
Nkx2-3P97334 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Nkx2-3P97334 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nkx2-3P97334 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nkx2-3P97334 Gm15957-201ENSMUST00000118893 974 ntBASIC18.24■□□□□ 0.51
Nkx2-3P97334 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Nkx2-3P97334 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC18.24■□□□□ 0.51
Nkx2-3P97334 Gm5035-201ENSMUST00000215581 927 ntBASIC18.24■□□□□ 0.51
Nkx2-3P97334 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nkx2-3P97334 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nkx2-3P97334 Gm8131-201ENSMUST00000213783 1570 ntBASIC18.24■□□□□ 0.51
Nkx2-3P97334 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nkx2-3P97334 Gm16425-201ENSMUST00000118143 3130 ntBASIC18.24■□□□□ 0.51
Nkx2-3P97334 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nkx2-3P97334 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nkx2-3P97334 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nkx2-3P97334 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Nkx2-3P97334 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nkx2-3P97334 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nkx2-3P97334 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nkx2-3P97334 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nkx2-3P97334 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nkx2-3P97334 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nkx2-3P97334 Gm21470-201ENSMUST00000187680 696 ntBASIC18.23■□□□□ 0.51
Nkx2-3P97334 AC155286.1-201ENSMUST00000218632 448 ntBASIC18.23■□□□□ 0.51
Nkx2-3P97334 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
Nkx2-3P97334 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nkx2-3P97334 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Nkx2-3P97334 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nkx2-3P97334 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nkx2-3P97334 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
Nkx2-3P97334 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.23■□□□□ 0.51
Nkx2-3P97334 Gm42690-201ENSMUST00000197921 1836 ntBASIC18.23■□□□□ 0.51
Nkx2-3P97334 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC18.23■□□□□ 0.51
Nkx2-3P97334 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nkx2-3P97334 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nkx2-3P97334 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC18.23■□□□□ 0.51
Nkx2-3P97334 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
Nkx2-3P97334 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nkx2-3P97334 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nkx2-3P97334 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nkx2-3P97334 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC18.22■□□□□ 0.51
Nkx2-3P97334 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Nkx2-3P97334 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nkx2-3P97334 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nkx2-3P97334 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nkx2-3P97334 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Nkx2-3P97334 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC18.22■□□□□ 0.51
Nkx2-3P97334 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC18.22■□□□□ 0.51
Nkx2-3P97334 Gm12960-201ENSMUST00000120017 1066 ntBASIC18.22■□□□□ 0.51
Nkx2-3P97334 Gm11918-201ENSMUST00000121660 179 ntBASIC18.22■□□□□ 0.51
Nkx2-3P97334 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nkx2-3P97334 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC18.22■□□□□ 0.51
Nkx2-3P97334 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC18.22■□□□□ 0.51
Nkx2-3P97334 CT030657.3-201ENSMUST00000222707 1200 ntBASIC18.22■□□□□ 0.51
Nkx2-3P97334 AC149294.4-201ENSMUST00000227870 882 ntBASIC18.22■□□□□ 0.51
Nkx2-3P97334 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nkx2-3P97334 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nkx2-3P97334 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms