Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Hmgb1P63158 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.08■□□□□ 0.16
Hmgb1P63158 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Hmgb1P63158 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.16
Hmgb1P63158 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.16
Hmgb1P63158 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hmgb1P63158 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hmgb1P63158 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC16.08■□□□□ 0.16
Hmgb1P63158 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Hmgb1P63158 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hmgb1P63158 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hmgb1P63158 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hmgb1P63158 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hmgb1P63158 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hmgb1P63158 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hmgb1P63158 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Hmgb1P63158 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hmgb1P63158 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC16.08■□□□□ 0.16
Hmgb1P63158 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Hmgb1P63158 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
Hmgb1P63158 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgb1P63158 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgb1P63158 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Hmgb1P63158 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC16.07■□□□□ 0.16
Hmgb1P63158 Gm38273-201ENSMUST00000194987 2382 ntBASIC16.07■□□□□ 0.16
Hmgb1P63158 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgb1P63158 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgb1P63158 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgb1P63158 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgb1P63158 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgb1P63158 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgb1P63158 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgb1P63158 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgb1P63158 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgb1P63158 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgb1P63158 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgb1P63158 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgb1P63158 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Hmgb1P63158 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgb1P63158 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC16.07■□□□□ 0.16
Hmgb1P63158 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgb1P63158 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgb1P63158 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgb1P63158 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Hmgb1P63158 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgb1P63158 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.07■□□□□ 0.16
Hmgb1P63158 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgb1P63158 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgb1P63158 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgb1P63158 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.07■□□□□ 0.16
Hmgb1P63158 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgb1P63158 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgb1P63158 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgb1P63158 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgb1P63158 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgb1P63158 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Hmgb1P63158 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgb1P63158 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgb1P63158 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgb1P63158 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hmgb1P63158 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hmgb1P63158 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hmgb1P63158 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Hmgb1P63158 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.06■□□□□ 0.16
Hmgb1P63158 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hmgb1P63158 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hmgb1P63158 Mbnl2-204ENSMUST00000227012 2390 ntBASIC16.06■□□□□ 0.16
Hmgb1P63158 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Hmgb1P63158 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC16.06■□□□□ 0.16
Hmgb1P63158 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Hmgb1P63158 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Hmgb1P63158 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hmgb1P63158 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hmgb1P63158 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hmgb1P63158 Gm12350-201ENSMUST00000121208 462 ntBASIC16.06■□□□□ 0.16
Hmgb1P63158 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Hmgb1P63158 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.06■□□□□ 0.16
Hmgb1P63158 AC155729.1-201ENSMUST00000227758 544 ntBASIC16.06■□□□□ 0.16
Hmgb1P63158 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hmgb1P63158 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Hmgb1P63158 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hmgb1P63158 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hmgb1P63158 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Hmgb1P63158 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hmgb1P63158 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hmgb1P63158 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Hmgb1P63158 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hmgb1P63158 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hmgb1P63158 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Hmgb1P63158 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hmgb1P63158 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hmgb1P63158 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hmgb1P63158 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Hmgb1P63158 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hmgb1P63158 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hmgb1P63158 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hmgb1P63158 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hmgb1P63158 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Hmgb1P63158 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Hmgb1P63158 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms