Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Rps28P62858 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Rps28P62858 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rps28P62858 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rps28P62858 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC8.55□□□□□ -1.04
Rps28P62858 Gm44806-201ENSMUST00000205574 2303 ntBASIC8.55□□□□□ -1.04
Rps28P62858 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rps28P62858 Gm13509-201ENSMUST00000119733 1308 ntBASIC8.55□□□□□ -1.04
Rps28P62858 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC8.55□□□□□ -1.04
Rps28P62858 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Rps28P62858 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rps28P62858 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Rps28P62858 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Rps28P62858 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rps28P62858 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rps28P62858 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Rps28P62858 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rps28P62858 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rps28P62858 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rps28P62858 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rps28P62858 CT573086.2-201ENSMUST00000227277 4992 ntBASIC8.55□□□□□ -1.04
Rps28P62858 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rps28P62858 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC8.55□□□□□ -1.04
Rps28P62858 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Rps28P62858 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rps28P62858 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rps28P62858 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Rps28P62858 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Rps28P62858 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rps28P62858 Gm36987-201ENSMUST00000194704 2979 ntBASIC8.55□□□□□ -1.04
Rps28P62858 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Rps28P62858 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC8.55□□□□□ -1.04
Rps28P62858 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Rps28P62858 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rps28P62858 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rps28P62858 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rps28P62858 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rps28P62858 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC8.55□□□□□ -1.04
Rps28P62858 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rps28P62858 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Rps28P62858 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rps28P62858 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rps28P62858 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rps28P62858 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC8.55□□□□□ -1.04
Rps28P62858 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rps28P62858 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Rps28P62858 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rps28P62858 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Rps28P62858 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rps28P62858 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Rps28P62858 Gm13437-201ENSMUST00000122434 1981 ntBASIC8.55□□□□□ -1.04
Rps28P62858 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rps28P62858 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rps28P62858 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rps28P62858 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Rps28P62858 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Rps28P62858 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rps28P62858 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Rps28P62858 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rps28P62858 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC8.54□□□□□ -1.04
Rps28P62858 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Rps28P62858 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
Rps28P62858 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Rps28P62858 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rps28P62858 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rps28P62858 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rps28P62858 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rps28P62858 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC8.54□□□□□ -1.04
Rps28P62858 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Rps28P62858 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rps28P62858 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rps28P62858 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rps28P62858 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Rps28P62858 AC154747.3-201ENSMUST00000224471 3470 ntBASIC8.54□□□□□ -1.04
Rps28P62858 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rps28P62858 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rps28P62858 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Rps28P62858 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Rps28P62858 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Rps28P62858 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC8.54□□□□□ -1.04
Rps28P62858 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rps28P62858 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rps28P62858 Gm45364-201ENSMUST00000210883 159 ntBASIC8.54□□□□□ -1.04
Rps28P62858 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC8.54□□□□□ -1.04
Rps28P62858 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rps28P62858 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rps28P62858 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
Rps28P62858 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Rps28P62858 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rps28P62858 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rps28P62858 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rps28P62858 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rps28P62858 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Rps28P62858 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
Rps28P62858 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rps28P62858 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC8.54□□□□□ -1.04
Rps28P62858 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rps28P62858 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Rps28P62858 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC8.54□□□□□ -1.04
Rps28P62858 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms