Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Gabra1P62812 Gm9013-201ENSMUST00000132939 882 ntBASIC12.31□□□□□ -0.44
Gabra1P62812 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.31□□□□□ -0.44
Gabra1P62812 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Gabra1P62812 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.31□□□□□ -0.44
Gabra1P62812 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.31□□□□□ -0.44
Gabra1P62812 Gm43799-201ENSMUST00000201845 579 ntBASIC12.31□□□□□ -0.44
Gabra1P62812 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Gabra1P62812 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.31□□□□□ -0.44
Gabra1P62812 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.31□□□□□ -0.44
Gabra1P62812 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.31□□□□□ -0.44
Gabra1P62812 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gabra1P62812 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gabra1P62812 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Gabra1P62812 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gabra1P62812 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gabra1P62812 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gabra1P62812 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gabra1P62812 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Gabra1P62812 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Gabra1P62812 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gabra1P62812 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gabra1P62812 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gabra1P62812 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gabra1P62812 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Gabra1P62812 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.31□□□□□ -0.44
Gabra1P62812 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Gabra1P62812 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gabra1P62812 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gabra1P62812 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Gabra1P62812 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.31□□□□□ -0.44
Gabra1P62812 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gabra1P62812 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gabra1P62812 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Gabra1P62812 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.31□□□□□ -0.44
Gabra1P62812 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gabra1P62812 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gabra1P62812 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gabra1P62812 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Gabra1P62812 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Gabra1P62812 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gabra1P62812 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gabra1P62812 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gabra1P62812 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gabra1P62812 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gabra1P62812 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.3□□□□□ -0.44
Gabra1P62812 Gm8668-201ENSMUST00000120559 1447 ntBASIC12.3□□□□□ -0.44
Gabra1P62812 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gabra1P62812 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gabra1P62812 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gabra1P62812 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gabra1P62812 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gabra1P62812 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Gabra1P62812 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gabra1P62812 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gabra1P62812 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gabra1P62812 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gabra1P62812 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Gabra1P62812 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Gabra1P62812 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC12.3□□□□□ -0.44
Gabra1P62812 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.3□□□□□ -0.44
Gabra1P62812 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gabra1P62812 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gabra1P62812 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Gabra1P62812 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gabra1P62812 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.3□□□□□ -0.44
Gabra1P62812 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.3□□□□□ -0.44
Gabra1P62812 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gabra1P62812 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gabra1P62812 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gabra1P62812 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Gabra1P62812 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gabra1P62812 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Gabra1P62812 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gabra1P62812 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gabra1P62812 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Gabra1P62812 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gabra1P62812 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gabra1P62812 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Gabra1P62812 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gabra1P62812 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gabra1P62812 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gabra1P62812 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gabra1P62812 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gabra1P62812 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Gabra1P62812 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gabra1P62812 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.3□□□□□ -0.44
Gabra1P62812 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gabra1P62812 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Gabra1P62812 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Gabra1P62812 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gabra1P62812 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gabra1P62812 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Gabra1P62812 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gabra1P62812 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gabra1P62812 Grk6-205ENSMUST00000224653 2976 ntBASIC12.29□□□□□ -0.44
Gabra1P62812 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gabra1P62812 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gabra1P62812 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Gabra1P62812 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms