Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cks1bP61025 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cks1bP61025 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cks1bP61025 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Cks1bP61025 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Cks1bP61025 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cks1bP61025 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cks1bP61025 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cks1bP61025 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Cks1bP61025 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cks1bP61025 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Cks1bP61025 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cks1bP61025 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
Cks1bP61025 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
Cks1bP61025 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC10.46□□□□□ -0.74
Cks1bP61025 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC10.46□□□□□ -0.74
Cks1bP61025 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC10.46□□□□□ -0.74
Cks1bP61025 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC10.46□□□□□ -0.74
Cks1bP61025 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Cks1bP61025 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cks1bP61025 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1bP61025 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Cks1bP61025 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1bP61025 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1bP61025 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1bP61025 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1bP61025 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC10.45□□□□□ -0.74
Cks1bP61025 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Cks1bP61025 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1bP61025 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Cks1bP61025 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1bP61025 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1bP61025 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1bP61025 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1bP61025 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1bP61025 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Cks1bP61025 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1bP61025 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1bP61025 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1bP61025 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC10.45□□□□□ -0.74
Cks1bP61025 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC10.45□□□□□ -0.74
Cks1bP61025 Gm20472-201ENSMUST00000174403 1240 ntBASIC10.45□□□□□ -0.74
Cks1bP61025 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC10.45□□□□□ -0.74
Cks1bP61025 Mir6404-201ENSMUST00000183699 94 ntBASIC10.45□□□□□ -0.74
Cks1bP61025 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC10.45□□□□□ -0.74
Cks1bP61025 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
Cks1bP61025 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC10.45□□□□□ -0.74
Cks1bP61025 Gm18101-201ENSMUST00000215769 548 ntBASIC10.45□□□□□ -0.74
Cks1bP61025 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC10.45□□□□□ -0.74
Cks1bP61025 Gm21559-201ENSMUST00000220638 855 ntBASIC10.45□□□□□ -0.74
Cks1bP61025 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1bP61025 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1bP61025 Gm8587-201ENSMUST00000076538 843 ntBASIC10.45□□□□□ -0.74
Cks1bP61025 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1bP61025 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Cks1bP61025 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1bP61025 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1bP61025 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1bP61025 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1bP61025 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1bP61025 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1bP61025 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1bP61025 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1bP61025 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1bP61025 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1bP61025 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Cks1bP61025 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC10.45□□□□□ -0.74
Cks1bP61025 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1bP61025 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC10.45□□□□□ -0.74
Cks1bP61025 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1bP61025 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1bP61025 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Cks1bP61025 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC10.44□□□□□ -0.74
Cks1bP61025 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1bP61025 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1bP61025 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1bP61025 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1bP61025 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Cks1bP61025 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1bP61025 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Cks1bP61025 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Cks1bP61025 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC10.44□□□□□ -0.74
Cks1bP61025 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1bP61025 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1bP61025 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1bP61025 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1bP61025 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1bP61025 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1bP61025 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1bP61025 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1bP61025 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1bP61025 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1bP61025 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC10.44□□□□□ -0.74
Cks1bP61025 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1bP61025 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1bP61025 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1bP61025 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1bP61025 Gm13559-201ENSMUST00000120476 863 ntBASIC10.44□□□□□ -0.74
Cks1bP61025 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC10.44□□□□□ -0.74
Cks1bP61025 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms