Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.44□□□□□ -0.1
Pdx1P52946 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Pdx1P52946 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdx1P52946 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdx1P52946 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.44□□□□□ -0.1
Pdx1P52946 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdx1P52946 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdx1P52946 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.44□□□□□ -0.1
Pdx1P52946 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdx1P52946 Gm11543-201ENSMUST00000120758 370 ntBASIC14.44□□□□□ -0.1
Pdx1P52946 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pdx1P52946 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.44□□□□□ -0.1
Pdx1P52946 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pdx1P52946 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.44□□□□□ -0.1
Pdx1P52946 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.44□□□□□ -0.1
Pdx1P52946 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.44□□□□□ -0.1
Pdx1P52946 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.44□□□□□ -0.1
Pdx1P52946 Gm45098-201ENSMUST00000207179 657 ntBASIC14.44□□□□□ -0.1
Pdx1P52946 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdx1P52946 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Pdx1P52946 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdx1P52946 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdx1P52946 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Pdx1P52946 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Pdx1P52946 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Pdx1P52946 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdx1P52946 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdx1P52946 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Pdx1P52946 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Pdx1P52946 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdx1P52946 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdx1P52946 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Pdx1P52946 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdx1P52946 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdx1P52946 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Pdx1P52946 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdx1P52946 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.43□□□□□ -0.1
Pdx1P52946 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdx1P52946 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Pdx1P52946 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pdx1P52946 Gm18889-201ENSMUST00000174284 929 ntBASIC14.43□□□□□ -0.1
Pdx1P52946 Gm2756-201ENSMUST00000195851 400 ntBASIC14.43□□□□□ -0.1
Pdx1P52946 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.43□□□□□ -0.1
Pdx1P52946 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.43□□□□□ -0.1
Pdx1P52946 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pdx1P52946 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdx1P52946 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Pdx1P52946 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pdx1P52946 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdx1P52946 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdx1P52946 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdx1P52946 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Pdx1P52946 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdx1P52946 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdx1P52946 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdx1P52946 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdx1P52946 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Pdx1P52946 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pdx1P52946 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Pdx1P52946 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdx1P52946 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdx1P52946 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdx1P52946 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdx1P52946 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdx1P52946 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdx1P52946 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Pdx1P52946 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdx1P52946 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pdx1P52946 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Pdx1P52946 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdx1P52946 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdx1P52946 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Pdx1P52946 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pdx1P52946 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Pdx1P52946 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.42□□□□□ -0.1
Pdx1P52946 Gm37230-201ENSMUST00000194491 818 ntBASIC14.42□□□□□ -0.1
Pdx1P52946 Gm43575-201ENSMUST00000196420 516 ntBASIC14.42□□□□□ -0.1
Pdx1P52946 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.42□□□□□ -0.1
Pdx1P52946 Chchd1-203ENSMUST00000224633 557 ntBASIC14.42□□□□□ -0.1
Pdx1P52946 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Pdx1P52946 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.42□□□□□ -0.1
Pdx1P52946 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdx1P52946 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdx1P52946 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdx1P52946 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdx1P52946 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdx1P52946 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Pdx1P52946 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdx1P52946 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Pdx1P52946 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdx1P52946 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdx1P52946 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdx1P52946 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.42□□□□□ -0.1
Pdx1P52946 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdx1P52946 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pdx1P52946 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdx1P52946 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdx1P52946 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdx1P52946 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Pdx1P52946 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms