Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps4bP46467 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.83□□□□□ -0.04
Vps4bP46467 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vps4bP46467 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps4bP46467 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Vps4bP46467 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps4bP46467 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps4bP46467 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps4bP46467 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vps4bP46467 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.82□□□□□ -0.04
Vps4bP46467 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
Vps4bP46467 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Vps4bP46467 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.82□□□□□ -0.04
Vps4bP46467 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps4bP46467 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps4bP46467 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vps4bP46467 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps4bP46467 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vps4bP46467 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.82□□□□□ -0.04
Vps4bP46467 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.82□□□□□ -0.04
Vps4bP46467 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps4bP46467 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.82□□□□□ -0.04
Vps4bP46467 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps4bP46467 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps4bP46467 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.82□□□□□ -0.04
Vps4bP46467 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Vps4bP46467 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps4bP46467 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps4bP46467 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.82□□□□□ -0.04
Vps4bP46467 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps4bP46467 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vps4bP46467 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps4bP46467 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Vps4bP46467 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.82□□□□□ -0.04
Vps4bP46467 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Vps4bP46467 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps4bP46467 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps4bP46467 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps4bP46467 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps4bP46467 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps4bP46467 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.81□□□□□ -0.04
Vps4bP46467 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Vps4bP46467 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps4bP46467 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps4bP46467 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.81□□□□□ -0.04
Vps4bP46467 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps4bP46467 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Vps4bP46467 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Vps4bP46467 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps4bP46467 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.81□□□□□ -0.04
Vps4bP46467 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.81□□□□□ -0.04
Vps4bP46467 Gm13464-201ENSMUST00000119418 935 ntBASIC14.81□□□□□ -0.04
Vps4bP46467 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Vps4bP46467 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vps4bP46467 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps4bP46467 Gm2756-201ENSMUST00000195851 400 ntBASIC14.81□□□□□ -0.04
Vps4bP46467 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps4bP46467 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps4bP46467 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps4bP46467 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.81□□□□□ -0.04
Vps4bP46467 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Vps4bP46467 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps4bP46467 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps4bP46467 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps4bP46467 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Vps4bP46467 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vps4bP46467 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps4bP46467 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vps4bP46467 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Vps4bP46467 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vps4bP46467 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Vps4bP46467 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps4bP46467 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps4bP46467 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Vps4bP46467 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps4bP46467 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps4bP46467 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps4bP46467 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vps4bP46467 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps4bP46467 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Vps4bP46467 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps4bP46467 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps4bP46467 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps4bP46467 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps4bP46467 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps4bP46467 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps4bP46467 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Vps4bP46467 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.8□□□□□ -0.04
Vps4bP46467 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.8□□□□□ -0.04
Vps4bP46467 Gm27300-201ENSMUST00000184085 97 ntBASIC14.8□□□□□ -0.04
Vps4bP46467 Gm27335-201ENSMUST00000184758 97 ntBASIC14.8□□□□□ -0.04
Vps4bP46467 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vps4bP46467 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vps4bP46467 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps4bP46467 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.8□□□□□ -0.04
Vps4bP46467 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.8□□□□□ -0.04
Vps4bP46467 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Vps4bP46467 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps4bP46467 Gm15590-201ENSMUST00000078419 552 ntBASIC14.8□□□□□ -0.04
Vps4bP46467 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms