Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.99□□□□□ -0.17
Sox18P43680 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox18P43680 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Sox18P43680 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Sox18P43680 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox18P43680 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.99□□□□□ -0.17
Sox18P43680 Gm13263-201ENSMUST00000121271 838 ntBASIC13.99□□□□□ -0.17
Sox18P43680 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sox18P43680 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.99□□□□□ -0.17
Sox18P43680 Mir1982-201ENSMUST00000157368 74 ntBASIC13.99□□□□□ -0.17
Sox18P43680 Mir6392-201ENSMUST00000184924 108 ntBASIC13.99□□□□□ -0.17
Sox18P43680 Gm28760-201ENSMUST00000185995 736 ntBASIC13.99□□□□□ -0.17
Sox18P43680 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.99□□□□□ -0.17
Sox18P43680 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.99□□□□□ -0.17
Sox18P43680 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.99□□□□□ -0.17
Sox18P43680 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Sox18P43680 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox18P43680 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sox18P43680 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sox18P43680 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox18P43680 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox18P43680 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Sox18P43680 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Sox18P43680 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox18P43680 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox18P43680 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.99□□□□□ -0.17
Sox18P43680 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox18P43680 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Sox18P43680 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox18P43680 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sox18P43680 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox18P43680 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox18P43680 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox18P43680 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox18P43680 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox18P43680 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.98□□□□□ -0.17
Sox18P43680 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox18P43680 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox18P43680 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox18P43680 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox18P43680 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox18P43680 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.98□□□□□ -0.17
Sox18P43680 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox18P43680 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox18P43680 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Sox18P43680 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox18P43680 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.98□□□□□ -0.17
Sox18P43680 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.98□□□□□ -0.17
Sox18P43680 Gm13366-201ENSMUST00000122198 970 ntBASIC13.98□□□□□ -0.17
Sox18P43680 Gm20825-201ENSMUST00000178149 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox18P43680 Gm7430-201ENSMUST00000193824 1144 ntBASIC13.98□□□□□ -0.17
Sox18P43680 Gm10766-202ENSMUST00000194123 606 ntBASIC13.98□□□□□ -0.17
Sox18P43680 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.98□□□□□ -0.17
Sox18P43680 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox18P43680 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Sox18P43680 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.98□□□□□ -0.17
Sox18P43680 Gm16476-201ENSMUST00000221544 139 ntBASIC13.98□□□□□ -0.17
Sox18P43680 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.98□□□□□ -0.17
Sox18P43680 CT010486.3-201ENSMUST00000224555 811 ntBASIC13.98□□□□□ -0.17
Sox18P43680 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox18P43680 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox18P43680 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox18P43680 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.98□□□□□ -0.17
Sox18P43680 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.98□□□□□ -0.17
Sox18P43680 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox18P43680 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox18P43680 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox18P43680 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Sox18P43680 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox18P43680 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox18P43680 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox18P43680 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.98□□□□□ -0.17
Sox18P43680 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox18P43680 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Sox18P43680 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox18P43680 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Sox18P43680 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox18P43680 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox18P43680 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.97□□□□□ -0.17
Sox18P43680 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox18P43680 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Sox18P43680 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.97□□□□□ -0.17
Sox18P43680 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox18P43680 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox18P43680 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox18P43680 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox18P43680 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox18P43680 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.97□□□□□ -0.17
Sox18P43680 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox18P43680 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox18P43680 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Sox18P43680 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sox18P43680 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Sox18P43680 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox18P43680 Gm12957-201ENSMUST00000117835 377 ntBASIC13.97□□□□□ -0.17
Sox18P43680 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.97□□□□□ -0.17
Sox18P43680 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Sox18P43680 Gm21854-201ENSMUST00000179901 471 ntBASIC13.97□□□□□ -0.17
Sox18P43680 Gm27892-201ENSMUST00000185017 106 ntBASIC13.97□□□□□ -0.17
Sox18P43680 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms