Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf4P43488 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf4P43488 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf4P43488 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Tnfsf4P43488 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf4P43488 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf4P43488 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf4P43488 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf4P43488 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf4P43488 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf4P43488 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf4P43488 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf4P43488 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf4P43488 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf4P43488 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf4P43488 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Tnfsf4P43488 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf4P43488 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Tnfsf4P43488 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf4P43488 Gm7153-201ENSMUST00000117092 455 ntBASIC14.11□□□□□ -0.15
Tnfsf4P43488 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf4P43488 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf4P43488 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.11□□□□□ -0.15
Tnfsf4P43488 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf4P43488 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Tnfsf4P43488 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf4P43488 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Tnfsf4P43488 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.11□□□□□ -0.15
Tnfsf4P43488 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Tnfsf4P43488 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.11□□□□□ -0.15
Tnfsf4P43488 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.11□□□□□ -0.15
Tnfsf4P43488 AV026068-213ENSMUST00000223675 1171 ntBASIC14.11□□□□□ -0.15
Tnfsf4P43488 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf4P43488 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf4P43488 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.11□□□□□ -0.15
Tnfsf4P43488 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Tnfsf4P43488 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf4P43488 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.11□□□□□ -0.15
Tnfsf4P43488 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tnfsf4P43488 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.11□□□□□ -0.15
Tnfsf4P43488 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Tnfsf4P43488 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf4P43488 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf4P43488 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Tnfsf4P43488 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf4P43488 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf4P43488 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf4P43488 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.1□□□□□ -0.15
Tnfsf4P43488 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf4P43488 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf4P43488 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf4P43488 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf4P43488 Gm13464-201ENSMUST00000119418 935 ntBASIC14.1□□□□□ -0.15
Tnfsf4P43488 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.1□□□□□ -0.15
Tnfsf4P43488 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf4P43488 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf4P43488 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.1□□□□□ -0.15
Tnfsf4P43488 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.1□□□□□ -0.15
Tnfsf4P43488 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf4P43488 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf4P43488 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Tnfsf4P43488 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf4P43488 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Tnfsf4P43488 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf4P43488 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Tnfsf4P43488 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf4P43488 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
Tnfsf4P43488 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.09□□□□□ -0.15
Tnfsf4P43488 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf4P43488 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf4P43488 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.09□□□□□ -0.15
Tnfsf4P43488 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf4P43488 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf4P43488 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf4P43488 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf4P43488 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf4P43488 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf4P43488 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf4P43488 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Tnfsf4P43488 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf4P43488 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Tnfsf4P43488 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Tnfsf4P43488 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf4P43488 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.09□□□□□ -0.15
Tnfsf4P43488 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf4P43488 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf4P43488 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.09□□□□□ -0.15
Tnfsf4P43488 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf4P43488 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf4P43488 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf4P43488 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf4P43488 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf4P43488 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.09□□□□□ -0.15
Tnfsf4P43488 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Tnfsf4P43488 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
Tnfsf4P43488 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf4P43488 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Tnfsf4P43488 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf4P43488 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf4P43488 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms