Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Mmp9P41245 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Mmp9P41245 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Mmp9P41245 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Mmp9P41245 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Mmp9P41245 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Mmp9P41245 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Mmp9P41245 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Mmp9P41245 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Mmp9P41245 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Mmp9P41245 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp9P41245 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp9P41245 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp9P41245 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp9P41245 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp9P41245 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.28□□□□□ -0.44
Mmp9P41245 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp9P41245 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Mmp9P41245 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp9P41245 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp9P41245 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp9P41245 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp9P41245 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp9P41245 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.28□□□□□ -0.44
Mmp9P41245 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp9P41245 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp9P41245 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp9P41245 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp9P41245 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp9P41245 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp9P41245 Gm13884-201ENSMUST00000118103 829 ntBASIC12.28□□□□□ -0.44
Mmp9P41245 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp9P41245 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp9P41245 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.28□□□□□ -0.44
Mmp9P41245 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Mmp9P41245 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp9P41245 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC12.28□□□□□ -0.44
Mmp9P41245 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp9P41245 AW822252-206ENSMUST00000208904 237 ntBASIC12.28□□□□□ -0.44
Mmp9P41245 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp9P41245 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp9P41245 Birc2-201ENSMUST00000054878 378 ntBASIC12.28□□□□□ -0.44
Mmp9P41245 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Mmp9P41245 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp9P41245 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Mmp9P41245 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp9P41245 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp9P41245 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp9P41245 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Mmp9P41245 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp9P41245 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp9P41245 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp9P41245 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Mmp9P41245 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp9P41245 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Mmp9P41245 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Mmp9P41245 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Mmp9P41245 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Mmp9P41245 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Mmp9P41245 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Mmp9P41245 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Mmp9P41245 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Mmp9P41245 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Mmp9P41245 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Mmp9P41245 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.27□□□□□ -0.45
Mmp9P41245 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC12.27□□□□□ -0.45
Mmp9P41245 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Mmp9P41245 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.27□□□□□ -0.45
Mmp9P41245 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC12.27□□□□□ -0.45
Mmp9P41245 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC12.27□□□□□ -0.45
Mmp9P41245 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Mmp9P41245 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.27□□□□□ -0.45
Mmp9P41245 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Mmp9P41245 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Mmp9P41245 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Mmp9P41245 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.27□□□□□ -0.45
Mmp9P41245 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Mmp9P41245 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.27□□□□□ -0.45
Mmp9P41245 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Mmp9P41245 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
Mmp9P41245 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp9P41245 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp9P41245 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp9P41245 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp9P41245 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp9P41245 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp9P41245 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp9P41245 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Mmp9P41245 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp9P41245 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp9P41245 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp9P41245 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp9P41245 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp9P41245 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp9P41245 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.26□□□□□ -0.45
Mmp9P41245 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp9P41245 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Mmp9P41245 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp9P41245 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp9P41245 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms