Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.75□□□□□ -0.21
Sox6P40645 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.75□□□□□ -0.21
Sox6P40645 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.75□□□□□ -0.21
Sox6P40645 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox6P40645 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox6P40645 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Sox6P40645 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox6P40645 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox6P40645 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox6P40645 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.75□□□□□ -0.21
Sox6P40645 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox6P40645 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox6P40645 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox6P40645 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox6P40645 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox6P40645 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Sox6P40645 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Sox6P40645 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox6P40645 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox6P40645 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox6P40645 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.74□□□□□ -0.21
Sox6P40645 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox6P40645 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox6P40645 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox6P40645 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox6P40645 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox6P40645 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox6P40645 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox6P40645 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox6P40645 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.74□□□□□ -0.21
Sox6P40645 Mir5126-201ENSMUST00000175513 77 ntBASIC13.74□□□□□ -0.21
Sox6P40645 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Sox6P40645 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox6P40645 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Sox6P40645 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox6P40645 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox6P40645 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox6P40645 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox6P40645 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox6P40645 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox6P40645 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox6P40645 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox6P40645 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox6P40645 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox6P40645 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
Sox6P40645 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox6P40645 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.73□□□□□ -0.21
Sox6P40645 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox6P40645 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sox6P40645 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox6P40645 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox6P40645 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox6P40645 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sox6P40645 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox6P40645 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox6P40645 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox6P40645 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox6P40645 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.73□□□□□ -0.21
Sox6P40645 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox6P40645 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Sox6P40645 Gm5682-201ENSMUST00000173402 505 ntBASIC13.73□□□□□ -0.21
Sox6P40645 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox6P40645 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.73□□□□□ -0.21
Sox6P40645 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Sox6P40645 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sox6P40645 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.73□□□□□ -0.21
Sox6P40645 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox6P40645 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.73□□□□□ -0.21
Sox6P40645 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox6P40645 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.73□□□□□ -0.21
Sox6P40645 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox6P40645 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox6P40645 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Sox6P40645 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox6P40645 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sox6P40645 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.72□□□□□ -0.21
Sox6P40645 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.72□□□□□ -0.21
Sox6P40645 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox6P40645 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Sox6P40645 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox6P40645 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox6P40645 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox6P40645 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox6P40645 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox6P40645 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox6P40645 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sox6P40645 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.72□□□□□ -0.21
Sox6P40645 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sox6P40645 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sox6P40645 Gm8318-201ENSMUST00000182954 872 ntBASIC13.72□□□□□ -0.21
Sox6P40645 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox6P40645 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.72□□□□□ -0.21
Sox6P40645 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox6P40645 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox6P40645 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox6P40645 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox6P40645 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Sox6P40645 Gm15590-201ENSMUST00000078419 552 ntBASIC13.72□□□□□ -0.21
Sox6P40645 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox6P40645 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms