Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Slc6a1P31648 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Slc6a1P31648 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Slc6a1P31648 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Slc6a1P31648 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.58□□□□□ -0.39
Slc6a1P31648 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Slc6a1P31648 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc6a1P31648 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc6a1P31648 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Slc6a1P31648 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Slc6a1P31648 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc6a1P31648 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc6a1P31648 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc6a1P31648 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc6a1P31648 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Slc6a1P31648 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc6a1P31648 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc6a1P31648 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Slc6a1P31648 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc6a1P31648 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Slc6a1P31648 Gm24589-201ENSMUST00000116692 94 ntBASIC12.58□□□□□ -0.4
Slc6a1P31648 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Slc6a1P31648 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.58□□□□□ -0.4
Slc6a1P31648 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Slc6a1P31648 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Slc6a1P31648 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc6a1P31648 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC12.58□□□□□ -0.4
Slc6a1P31648 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.58□□□□□ -0.4
Slc6a1P31648 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.58□□□□□ -0.4
Slc6a1P31648 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc6a1P31648 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc6a1P31648 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Slc6a1P31648 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc6a1P31648 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc6a1P31648 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc6a1P31648 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.58□□□□□ -0.4
Slc6a1P31648 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc6a1P31648 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc6a1P31648 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc6a1P31648 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc6a1P31648 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Slc6a1P31648 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc6a1P31648 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a1P31648 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a1P31648 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a1P31648 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a1P31648 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.57□□□□□ -0.4
Slc6a1P31648 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a1P31648 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.57□□□□□ -0.4
Slc6a1P31648 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a1P31648 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a1P31648 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a1P31648 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.57□□□□□ -0.4
Slc6a1P31648 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.57□□□□□ -0.4
Slc6a1P31648 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a1P31648 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC12.57□□□□□ -0.4
Slc6a1P31648 Gm28659-201ENSMUST00000188013 759 ntBASIC12.57□□□□□ -0.4
Slc6a1P31648 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a1P31648 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a1P31648 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a1P31648 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a1P31648 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.57□□□□□ -0.4
Slc6a1P31648 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.57□□□□□ -0.4
Slc6a1P31648 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.57□□□□□ -0.4
Slc6a1P31648 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Slc6a1P31648 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a1P31648 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a1P31648 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.57□□□□□ -0.4
Slc6a1P31648 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a1P31648 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a1P31648 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a1P31648 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Slc6a1P31648 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a1P31648 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a1P31648 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a1P31648 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a1P31648 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a1P31648 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Slc6a1P31648 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a1P31648 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Slc6a1P31648 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a1P31648 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a1P31648 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a1P31648 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a1P31648 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a1P31648 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a1P31648 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a1P31648 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a1P31648 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a1P31648 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.56□□□□□ -0.4
Slc6a1P31648 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a1P31648 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a1P31648 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Slc6a1P31648 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a1P31648 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a1P31648 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a1P31648 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a1P31648 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a1P31648 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a1P31648 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms