Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nedd8P29595 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nedd8P29595 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nedd8P29595 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nedd8P29595 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Nedd8P29595 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.51□□□□□ -0.25
Nedd8P29595 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Nedd8P29595 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nedd8P29595 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nedd8P29595 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nedd8P29595 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nedd8P29595 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nedd8P29595 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nedd8P29595 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Nedd8P29595 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nedd8P29595 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC13.51□□□□□ -0.25
Nedd8P29595 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC13.51□□□□□ -0.25
Nedd8P29595 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nedd8P29595 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Nedd8P29595 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.51□□□□□ -0.25
Nedd8P29595 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nedd8P29595 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Nedd8P29595 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nedd8P29595 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC13.51□□□□□ -0.25
Nedd8P29595 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Nedd8P29595 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.51□□□□□ -0.25
Nedd8P29595 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nedd8P29595 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nedd8P29595 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nedd8P29595 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nedd8P29595 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Nedd8P29595 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Nedd8P29595 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nedd8P29595 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nedd8P29595 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.51□□□□□ -0.25
Nedd8P29595 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nedd8P29595 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nedd8P29595 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nedd8P29595 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.5□□□□□ -0.25
Nedd8P29595 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.5□□□□□ -0.25
Nedd8P29595 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nedd8P29595 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nedd8P29595 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Nedd8P29595 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nedd8P29595 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Nedd8P29595 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nedd8P29595 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nedd8P29595 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nedd8P29595 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nedd8P29595 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Nedd8P29595 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nedd8P29595 Gm18101-201ENSMUST00000215769 548 ntBASIC13.5□□□□□ -0.25
Nedd8P29595 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nedd8P29595 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC13.5□□□□□ -0.25
Nedd8P29595 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Nedd8P29595 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nedd8P29595 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nedd8P29595 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nedd8P29595 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nedd8P29595 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nedd8P29595 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nedd8P29595 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nedd8P29595 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nedd8P29595 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Nedd8P29595 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nedd8P29595 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Nedd8P29595 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Nedd8P29595 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nedd8P29595 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.49□□□□□ -0.25
Nedd8P29595 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nedd8P29595 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.49□□□□□ -0.25
Nedd8P29595 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Nedd8P29595 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nedd8P29595 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nedd8P29595 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nedd8P29595 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nedd8P29595 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nedd8P29595 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nedd8P29595 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.49□□□□□ -0.25
Nedd8P29595 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nedd8P29595 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nedd8P29595 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Nedd8P29595 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC13.49□□□□□ -0.25
Nedd8P29595 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nedd8P29595 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Nedd8P29595 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.49□□□□□ -0.25
Nedd8P29595 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.49□□□□□ -0.25
Nedd8P29595 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC13.49□□□□□ -0.25
Nedd8P29595 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nedd8P29595 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nedd8P29595 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nedd8P29595 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nedd8P29595 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC13.49□□□□□ -0.25
Nedd8P29595 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nedd8P29595 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nedd8P29595 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nedd8P29595 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Nedd8P29595 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.49□□□□□ -0.25
Nedd8P29595 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nedd8P29595 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms