Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.2□□□□□ -0.46
Col8a2P25318 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col8a2P25318 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col8a2P25318 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Col8a2P25318 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col8a2P25318 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col8a2P25318 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Col8a2P25318 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col8a2P25318 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col8a2P25318 Gm25287-201ENSMUST00000103846 110 ntBASIC12.2□□□□□ -0.46
Col8a2P25318 Gm22918-201ENSMUST00000103855 110 ntBASIC12.2□□□□□ -0.46
Col8a2P25318 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col8a2P25318 Gm8749-201ENSMUST00000117737 331 ntBASIC12.2□□□□□ -0.46
Col8a2P25318 Gm13823-201ENSMUST00000119930 345 ntBASIC12.2□□□□□ -0.46
Col8a2P25318 Gm12151-201ENSMUST00000121374 290 ntBASIC12.2□□□□□ -0.46
Col8a2P25318 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.2□□□□□ -0.46
Col8a2P25318 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col8a2P25318 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col8a2P25318 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.2□□□□□ -0.46
Col8a2P25318 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col8a2P25318 Gm9726-201ENSMUST00000180321 678 ntBASIC12.2□□□□□ -0.46
Col8a2P25318 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col8a2P25318 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col8a2P25318 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col8a2P25318 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col8a2P25318 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col8a2P25318 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.2□□□□□ -0.46
Col8a2P25318 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.2□□□□□ -0.46
Col8a2P25318 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col8a2P25318 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Col8a2P25318 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col8a2P25318 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col8a2P25318 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col8a2P25318 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col8a2P25318 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col8a2P25318 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col8a2P25318 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col8a2P25318 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col8a2P25318 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col8a2P25318 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col8a2P25318 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Col8a2P25318 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col8a2P25318 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col8a2P25318 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.19□□□□□ -0.46
Col8a2P25318 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col8a2P25318 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col8a2P25318 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.19□□□□□ -0.46
Col8a2P25318 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col8a2P25318 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col8a2P25318 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col8a2P25318 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Col8a2P25318 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col8a2P25318 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Col8a2P25318 Gm37230-201ENSMUST00000194491 818 ntBASIC12.19□□□□□ -0.46
Col8a2P25318 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col8a2P25318 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.19□□□□□ -0.46
Col8a2P25318 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.19□□□□□ -0.46
Col8a2P25318 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col8a2P25318 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col8a2P25318 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col8a2P25318 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col8a2P25318 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col8a2P25318 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col8a2P25318 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col8a2P25318 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col8a2P25318 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col8a2P25318 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Col8a2P25318 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.18□□□□□ -0.46
Col8a2P25318 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col8a2P25318 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col8a2P25318 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Col8a2P25318 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col8a2P25318 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Col8a2P25318 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Col8a2P25318 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col8a2P25318 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col8a2P25318 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Col8a2P25318 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Col8a2P25318 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col8a2P25318 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col8a2P25318 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Col8a2P25318 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col8a2P25318 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col8a2P25318 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col8a2P25318 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col8a2P25318 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.18□□□□□ -0.46
Col8a2P25318 Gm27622-201ENSMUST00000183779 60 ntBASIC12.18□□□□□ -0.46
Col8a2P25318 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col8a2P25318 Olfr286-202ENSMUST00000205305 969 ntBASIC12.18□□□□□ -0.46
Col8a2P25318 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col8a2P25318 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.18□□□□□ -0.46
Col8a2P25318 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col8a2P25318 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col8a2P25318 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col8a2P25318 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Col8a2P25318 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col8a2P25318 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Col8a2P25318 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Col8a2P25318 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col8a2P25318 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms