Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clk1P22518 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clk1P22518 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.64□□□□□ -0.23
Clk1P22518 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Clk1P22518 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clk1P22518 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clk1P22518 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Clk1P22518 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clk1P22518 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clk1P22518 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Clk1P22518 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clk1P22518 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Clk1P22518 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clk1P22518 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clk1P22518 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clk1P22518 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clk1P22518 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clk1P22518 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clk1P22518 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clk1P22518 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.63□□□□□ -0.23
Clk1P22518 Gm12008-201ENSMUST00000117791 755 ntBASIC13.63□□□□□ -0.23
Clk1P22518 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.63□□□□□ -0.23
Clk1P22518 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Clk1P22518 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Clk1P22518 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Clk1P22518 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clk1P22518 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clk1P22518 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clk1P22518 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Clk1P22518 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clk1P22518 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Clk1P22518 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clk1P22518 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.63□□□□□ -0.23
Clk1P22518 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clk1P22518 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clk1P22518 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clk1P22518 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clk1P22518 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clk1P22518 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clk1P22518 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clk1P22518 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Clk1P22518 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.62□□□□□ -0.23
Clk1P22518 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Clk1P22518 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Clk1P22518 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clk1P22518 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clk1P22518 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clk1P22518 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clk1P22518 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clk1P22518 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clk1P22518 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clk1P22518 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
Clk1P22518 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clk1P22518 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clk1P22518 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clk1P22518 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clk1P22518 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.62□□□□□ -0.23
Clk1P22518 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.62□□□□□ -0.23
Clk1P22518 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.62□□□□□ -0.23
Clk1P22518 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.62□□□□□ -0.23
Clk1P22518 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clk1P22518 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clk1P22518 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Clk1P22518 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clk1P22518 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clk1P22518 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clk1P22518 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clk1P22518 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clk1P22518 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clk1P22518 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clk1P22518 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Clk1P22518 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Clk1P22518 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clk1P22518 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clk1P22518 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clk1P22518 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Clk1P22518 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clk1P22518 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clk1P22518 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clk1P22518 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clk1P22518 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clk1P22518 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clk1P22518 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clk1P22518 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Clk1P22518 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Clk1P22518 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clk1P22518 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clk1P22518 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clk1P22518 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clk1P22518 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.61□□□□□ -0.23
Clk1P22518 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clk1P22518 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.61□□□□□ -0.23
Clk1P22518 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.61□□□□□ -0.23
Clk1P22518 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.61□□□□□ -0.23
Clk1P22518 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clk1P22518 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.61□□□□□ -0.23
Clk1P22518 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clk1P22518 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC13.61□□□□□ -0.23
Clk1P22518 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clk1P22518 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms