Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgn1P18608 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgn1P18608 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgn1P18608 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.37□□□□□ -0.27
Hmgn1P18608 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.37□□□□□ -0.27
Hmgn1P18608 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.37□□□□□ -0.27
Hmgn1P18608 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgn1P18608 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgn1P18608 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.37□□□□□ -0.27
Hmgn1P18608 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.37□□□□□ -0.27
Hmgn1P18608 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgn1P18608 Gm7787-201ENSMUST00000216858 688 ntBASIC13.37□□□□□ -0.27
Hmgn1P18608 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgn1P18608 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgn1P18608 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgn1P18608 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgn1P18608 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgn1P18608 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Hmgn1P18608 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgn1P18608 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Hmgn1P18608 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgn1P18608 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.37□□□□□ -0.27
Hmgn1P18608 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgn1P18608 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgn1P18608 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgn1P18608 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgn1P18608 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgn1P18608 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgn1P18608 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgn1P18608 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgn1P18608 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgn1P18608 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Hmgn1P18608 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hmgn1P18608 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Hmgn1P18608 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgn1P18608 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgn1P18608 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgn1P18608 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgn1P18608 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.36□□□□□ -0.27
Hmgn1P18608 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgn1P18608 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Hmgn1P18608 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.36□□□□□ -0.27
Hmgn1P18608 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgn1P18608 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Hmgn1P18608 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgn1P18608 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgn1P18608 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.36□□□□□ -0.27
Hmgn1P18608 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Hmgn1P18608 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgn1P18608 Gm13464-201ENSMUST00000119418 935 ntBASIC13.36□□□□□ -0.27
Hmgn1P18608 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.36□□□□□ -0.27
Hmgn1P18608 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgn1P18608 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgn1P18608 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.36□□□□□ -0.27
Hmgn1P18608 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.36□□□□□ -0.27
Hmgn1P18608 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.36□□□□□ -0.27
Hmgn1P18608 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgn1P18608 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Hmgn1P18608 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgn1P18608 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.36□□□□□ -0.27
Hmgn1P18608 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Hmgn1P18608 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgn1P18608 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.36□□□□□ -0.27
Hmgn1P18608 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgn1P18608 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgn1P18608 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgn1P18608 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgn1P18608 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgn1P18608 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgn1P18608 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgn1P18608 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgn1P18608 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgn1P18608 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgn1P18608 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgn1P18608 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgn1P18608 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgn1P18608 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hmgn1P18608 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.35□□□□□ -0.27
Hmgn1P18608 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Hmgn1P18608 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmgn1P18608 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmgn1P18608 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hmgn1P18608 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.35□□□□□ -0.27
Hmgn1P18608 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmgn1P18608 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hmgn1P18608 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmgn1P18608 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Hmgn1P18608 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Hmgn1P18608 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.35□□□□□ -0.27
Hmgn1P18608 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmgn1P18608 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmgn1P18608 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
Hmgn1P18608 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Hmgn1P18608 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Hmgn1P18608 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmgn1P18608 Gm14042-201ENSMUST00000120139 833 ntBASIC13.35□□□□□ -0.27
Hmgn1P18608 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.35□□□□□ -0.27
Hmgn1P18608 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.35□□□□□ -0.27
Hmgn1P18608 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Hmgn1P18608 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms