Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cd48P18181 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cd48P18181 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cd48P18181 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cd48P18181 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC13.12□□□□□ -0.31
Cd48P18181 Gm7153-201ENSMUST00000117092 455 ntBASIC13.12□□□□□ -0.31
Cd48P18181 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.12□□□□□ -0.31
Cd48P18181 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Cd48P18181 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Cd48P18181 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.12□□□□□ -0.31
Cd48P18181 AV026068-213ENSMUST00000223675 1171 ntBASIC13.12□□□□□ -0.31
Cd48P18181 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cd48P18181 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cd48P18181 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cd48P18181 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Cd48P18181 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cd48P18181 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cd48P18181 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Cd48P18181 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cd48P18181 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Cd48P18181 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cd48P18181 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cd48P18181 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cd48P18181 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.12□□□□□ -0.31
Cd48P18181 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.12□□□□□ -0.31
Cd48P18181 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.11□□□□□ -0.31
Cd48P18181 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd48P18181 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd48P18181 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd48P18181 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Cd48P18181 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Cd48P18181 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.11□□□□□ -0.31
Cd48P18181 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd48P18181 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd48P18181 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd48P18181 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Cd48P18181 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd48P18181 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Cd48P18181 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.11□□□□□ -0.31
Cd48P18181 Mir8098-201ENSMUST00000184011 137 ntBASIC13.11□□□□□ -0.31
Cd48P18181 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cd48P18181 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd48P18181 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.11□□□□□ -0.31
Cd48P18181 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd48P18181 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd48P18181 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Cd48P18181 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.11□□□□□ -0.31
Cd48P18181 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd48P18181 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd48P18181 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd48P18181 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
Cd48P18181 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd48P18181 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Cd48P18181 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd48P18181 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd48P18181 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd48P18181 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd48P18181 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd48P18181 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd48P18181 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.1□□□□□ -0.31
Cd48P18181 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Cd48P18181 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd48P18181 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cd48P18181 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd48P18181 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Cd48P18181 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Cd48P18181 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cd48P18181 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd48P18181 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd48P18181 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd48P18181 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Cd48P18181 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd48P18181 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd48P18181 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cd48P18181 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd48P18181 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Cd48P18181 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd48P18181 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd48P18181 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd48P18181 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd48P18181 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd48P18181 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cd48P18181 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd48P18181 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd48P18181 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd48P18181 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd48P18181 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Cd48P18181 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd48P18181 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd48P18181 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd48P18181 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Cd48P18181 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd48P18181 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd48P18181 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd48P18181 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cd48P18181 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cd48P18181 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Cd48P18181 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cd48P18181 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.09□□□□□ -0.31
Cd48P18181 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms