Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hmga1P17095 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hmga1P17095 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hmga1P17095 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Hmga1P17095 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Hmga1P17095 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmga1P17095 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmga1P17095 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Hmga1P17095 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmga1P17095 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Hmga1P17095 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmga1P17095 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Hmga1P17095 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmga1P17095 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmga1P17095 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmga1P17095 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmga1P17095 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmga1P17095 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmga1P17095 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Hmga1P17095 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.87□□□□□ -0.03
Hmga1P17095 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmga1P17095 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Hmga1P17095 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Hmga1P17095 Gm44855-201ENSMUST00000205725 362 ntBASIC14.87□□□□□ -0.03
Hmga1P17095 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Hmga1P17095 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmga1P17095 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.87□□□□□ -0.03
Hmga1P17095 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.87□□□□□ -0.03
Hmga1P17095 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Hmga1P17095 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmga1P17095 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmga1P17095 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Hmga1P17095 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmga1P17095 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.87□□□□□ -0.03
Hmga1P17095 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.87□□□□□ -0.03
Hmga1P17095 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Hmga1P17095 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.87□□□□□ -0.03
Hmga1P17095 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmga1P17095 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmga1P17095 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.87□□□□□ -0.03
Hmga1P17095 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmga1P17095 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmga1P17095 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmga1P17095 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmga1P17095 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmga1P17095 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hmga1P17095 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmga1P17095 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmga1P17095 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Hmga1P17095 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmga1P17095 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmga1P17095 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.86□□□□□ -0.03
Hmga1P17095 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.86□□□□□ -0.03
Hmga1P17095 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Hmga1P17095 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
Hmga1P17095 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hmga1P17095 Gm23547-201ENSMUST00000158210 271 ntBASIC14.86□□□□□ -0.03
Hmga1P17095 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hmga1P17095 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.86□□□□□ -0.03
Hmga1P17095 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Hmga1P17095 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Hmga1P17095 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
Hmga1P17095 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Hmga1P17095 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hmga1P17095 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmga1P17095 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmga1P17095 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmga1P17095 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmga1P17095 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmga1P17095 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmga1P17095 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmga1P17095 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmga1P17095 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmga1P17095 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Hmga1P17095 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.85□□□□□ -0.03
Hmga1P17095 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmga1P17095 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmga1P17095 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Hmga1P17095 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmga1P17095 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hmga1P17095 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Hmga1P17095 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.85□□□□□ -0.03
Hmga1P17095 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hmga1P17095 Gm7488-201ENSMUST00000117148 684 ntBASIC14.85□□□□□ -0.03
Hmga1P17095 Gm14042-201ENSMUST00000120139 833 ntBASIC14.85□□□□□ -0.03
Hmga1P17095 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.85□□□□□ -0.03
Hmga1P17095 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Hmga1P17095 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.85□□□□□ -0.03
Hmga1P17095 Gm6916-202ENSMUST00000205523 195 ntBASIC14.85□□□□□ -0.03
Hmga1P17095 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.85□□□□□ -0.03
Hmga1P17095 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmga1P17095 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmga1P17095 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmga1P17095 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmga1P17095 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Hmga1P17095 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmga1P17095 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hmga1P17095 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmga1P17095 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmga1P17095 Syt7-205ENSMUST00000224135 1557 ntBASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms