Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a1P02463 Gm8775-201ENSMUST00000170943 1327 ntBASIC17.68■□□□□ 0.42
Col4a1P02463 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a1P02463 AC115735.4-201ENSMUST00000227460 1944 ntBASIC17.68■□□□□ 0.42
Col4a1P02463 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a1P02463 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a1P02463 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a1P02463 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a1P02463 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a1P02463 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Col4a1P02463 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a1P02463 Gm18027-201ENSMUST00000218947 619 ntBASIC17.67■□□□□ 0.42
Col4a1P02463 AC156560.2-201ENSMUST00000221232 264 ntBASIC17.67■□□□□ 0.42
Col4a1P02463 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a1P02463 Gm5356-201ENSMUST00000093326 615 ntBASIC17.67■□□□□ 0.42
Col4a1P02463 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Col4a1P02463 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a1P02463 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a1P02463 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a1P02463 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a1P02463 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a1P02463 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a1P02463 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.67■□□□□ 0.42
Col4a1P02463 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a1P02463 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Col4a1P02463 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.67■□□□□ 0.42
Col4a1P02463 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a1P02463 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC17.67■□□□□ 0.42
Col4a1P02463 Gm19078-201ENSMUST00000206311 727 ntBASIC17.67■□□□□ 0.42
Col4a1P02463 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC17.67■□□□□ 0.42
Col4a1P02463 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a1P02463 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a1P02463 Gm14451-201ENSMUST00000121581 1542 ntBASIC17.67■□□□□ 0.42
Col4a1P02463 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a1P02463 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.67■□□□□ 0.42
Col4a1P02463 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a1P02463 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC17.67■□□□□ 0.42
Col4a1P02463 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a1P02463 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a1P02463 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.66■□□□□ 0.42
Col4a1P02463 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col4a1P02463 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col4a1P02463 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col4a1P02463 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Col4a1P02463 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Col4a1P02463 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Col4a1P02463 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col4a1P02463 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Col4a1P02463 Ighv8-14-201ENSMUST00000196781 358 ntBASIC17.66■□□□□ 0.42
Col4a1P02463 Gm9899-201ENSMUST00000065519 555 ntBASIC17.66■□□□□ 0.42
Col4a1P02463 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.66■□□□□ 0.42
Col4a1P02463 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col4a1P02463 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC17.66■□□□□ 0.42
Col4a1P02463 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col4a1P02463 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col4a1P02463 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col4a1P02463 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col4a1P02463 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a1P02463 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Col4a1P02463 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Col4a1P02463 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a1P02463 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Col4a1P02463 Mir1894-201ENSMUST00000122802 81 ntBASIC17.65■□□□□ 0.42
Col4a1P02463 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC17.65■□□□□ 0.42
Col4a1P02463 Gm9002-201ENSMUST00000178437 499 ntBASIC17.65■□□□□ 0.42
Col4a1P02463 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a1P02463 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC17.65■□□□□ 0.42
Col4a1P02463 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC17.65■□□□□ 0.42
Col4a1P02463 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC17.65■□□□□ 0.42
Col4a1P02463 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC17.65■□□□□ 0.42
Col4a1P02463 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a1P02463 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Col4a1P02463 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a1P02463 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a1P02463 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Col4a1P02463 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a1P02463 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a1P02463 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a1P02463 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.65■□□□□ 0.42
Col4a1P02463 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a1P02463 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Col4a1P02463 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Col4a1P02463 Gm6244-201ENSMUST00000178732 841 ntBASIC17.64■□□□□ 0.42
Col4a1P02463 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Col4a1P02463 Gm18307-201ENSMUST00000206864 949 ntBASIC17.64■□□□□ 0.42
Col4a1P02463 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a1P02463 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a1P02463 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.64■□□□□ 0.41
Col4a1P02463 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC17.64■□□□□ 0.41
Col4a1P02463 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC17.64■□□□□ 0.41
Col4a1P02463 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a1P02463 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a1P02463 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a1P02463 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a1P02463 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Col4a1P02463 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a1P02463 Gm43094-201ENSMUST00000196549 921 ntBASIC17.64■□□□□ 0.41
Col4a1P02463 Gm4971-201ENSMUST00000205991 1108 ntBASIC17.64■□□□□ 0.41
Col4a1P02463 Gm44608-201ENSMUST00000206827 855 ntBASIC17.64■□□□□ 0.41
Col4a1P02463 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms