Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Hbb-b1P02088 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Hbb-b1P02088 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
Hbb-b1P02088 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hbb-b1P02088 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hbb-b1P02088 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hbb-b1P02088 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hbb-b1P02088 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hbb-b1P02088 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC10.29□□□□□ -0.76
Hbb-b1P02088 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hbb-b1P02088 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Hbb-b1P02088 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hbb-b1P02088 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hbb-b1P02088 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC10.29□□□□□ -0.76
Hbb-b1P02088 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Hbb-b1P02088 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC10.29□□□□□ -0.76
Hbb-b1P02088 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hbb-b1P02088 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hbb-b1P02088 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC10.29□□□□□ -0.76
Hbb-b1P02088 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hbb-b1P02088 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hbb-b1P02088 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hbb-b1P02088 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hbb-b1P02088 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hbb-b1P02088 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hbb-b1P02088 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC10.29□□□□□ -0.76
Hbb-b1P02088 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Hbb-b1P02088 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hbb-b1P02088 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hbb-b1P02088 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hbb-b1P02088 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hbb-b1P02088 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hbb-b1P02088 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hbb-b1P02088 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Hbb-b1P02088 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Hbb-b1P02088 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Hbb-b1P02088 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hbb-b1P02088 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Hbb-b1P02088 Gm5639-201ENSMUST00000122305 2403 ntBASIC10.28□□□□□ -0.76
Hbb-b1P02088 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hbb-b1P02088 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hbb-b1P02088 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Hbb-b1P02088 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hbb-b1P02088 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Hbb-b1P02088 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Hbb-b1P02088 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Hbb-b1P02088 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Hbb-b1P02088 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hbb-b1P02088 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hbb-b1P02088 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hbb-b1P02088 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC10.28□□□□□ -0.76
Hbb-b1P02088 Gm10052-201ENSMUST00000168019 960 ntBASIC10.28□□□□□ -0.76
Hbb-b1P02088 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC10.28□□□□□ -0.76
Hbb-b1P02088 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC10.28□□□□□ -0.76
Hbb-b1P02088 Gm44430-201ENSMUST00000203376 995 ntBASIC10.28□□□□□ -0.76
Hbb-b1P02088 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC10.28□□□□□ -0.76
Hbb-b1P02088 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hbb-b1P02088 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hbb-b1P02088 Gm7729-201ENSMUST00000050143 801 ntBASIC10.28□□□□□ -0.76
Hbb-b1P02088 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hbb-b1P02088 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Hbb-b1P02088 AC155298.2-201ENSMUST00000225485 6226 ntBASIC10.28□□□□□ -0.76
Hbb-b1P02088 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Hbb-b1P02088 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hbb-b1P02088 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Hbb-b1P02088 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Hbb-b1P02088 Rubie-203ENSMUST00000227803 2430 ntBASIC10.28□□□□□ -0.76
Hbb-b1P02088 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hbb-b1P02088 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Hbb-b1P02088 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hbb-b1P02088 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hbb-b1P02088 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hbb-b1P02088 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hbb-b1P02088 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hbb-b1P02088 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Hbb-b1P02088 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hbb-b1P02088 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC10.28□□□□□ -0.76
Hbb-b1P02088 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hbb-b1P02088 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC10.28□□□□□ -0.76
Hbb-b1P02088 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Hbb-b1P02088 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hbb-b1P02088 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Hbb-b1P02088 Gm44241-201ENSMUST00000203230 1662 ntBASIC10.28□□□□□ -0.76
Hbb-b1P02088 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hbb-b1P02088 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hbb-b1P02088 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hbb-b1P02088 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC10.28□□□□□ -0.76
Hbb-b1P02088 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Hbb-b1P02088 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hbb-b1P02088 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Hbb-b1P02088 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Hbb-b1P02088 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Hbb-b1P02088 Grk6-205ENSMUST00000224653 2976 ntBASIC10.27□□□□□ -0.76
Hbb-b1P02088 AC139054.1-201ENSMUST00000226898 1598 ntBASIC10.27□□□□□ -0.76
Hbb-b1P02088 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
Hbb-b1P02088 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hbb-b1P02088 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC10.27□□□□□ -0.77
Hbb-b1P02088 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hbb-b1P02088 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hbb-b1P02088 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms