Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
P01852 Gm26308-201ENSMUST00000157768 69 ntBASIC13.37□□□□□ -0.27
P01852 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.37□□□□□ -0.27
P01852 Gm18057-201ENSMUST00000208220 503 ntBASIC13.37□□□□□ -0.27
P01852 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P01852 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
P01852 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P01852 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.37□□□□□ -0.27
P01852 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
P01852 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P01852 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
P01852 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P01852 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
P01852 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P01852 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P01852 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P01852 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
P01852 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
P01852 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P01852 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P01852 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P01852 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P01852 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
P01852 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
P01852 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
P01852 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
P01852 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.36□□□□□ -0.27
P01852 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P01852 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
P01852 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
P01852 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
P01852 Gm6973-201ENSMUST00000117080 721 ntBASIC13.36□□□□□ -0.27
P01852 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
P01852 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.36□□□□□ -0.27
P01852 Gm18737-201ENSMUST00000173594 937 ntBASIC13.36□□□□□ -0.27
P01852 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P01852 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
P01852 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.36□□□□□ -0.27
P01852 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P01852 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P01852 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P01852 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P01852 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P01852 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
P01852 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
P01852 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
P01852 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
P01852 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
P01852 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
P01852 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.36□□□□□ -0.27
P01852 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
P01852 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
P01852 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
P01852 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
P01852 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
P01852 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P01852 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P01852 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.35□□□□□ -0.27
P01852 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P01852 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
P01852 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.35□□□□□ -0.27
P01852 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P01852 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.35□□□□□ -0.27
P01852 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
P01852 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P01852 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
P01852 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P01852 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.35□□□□□ -0.27
P01852 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P01852 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P01852 Gm11543-201ENSMUST00000120758 370 ntBASIC13.35□□□□□ -0.27
P01852 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.35□□□□□ -0.27
P01852 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
P01852 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.35□□□□□ -0.27
P01852 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.35□□□□□ -0.27
P01852 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P01852 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P01852 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
P01852 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
P01852 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
P01852 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
P01852 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
P01852 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
P01852 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
P01852 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
P01852 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
P01852 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P01852 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
P01852 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
P01852 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
P01852 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P01852 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
P01852 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
P01852 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
P01852 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P01852 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P01852 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P01852 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
P01852 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P01852 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms