Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sh2d1aO88890 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sh2d1aO88890 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC10.36□□□□□ -0.75
Sh2d1aO88890 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
Sh2d1aO88890 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sh2d1aO88890 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sh2d1aO88890 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sh2d1aO88890 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sh2d1aO88890 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sh2d1aO88890 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sh2d1aO88890 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC10.36□□□□□ -0.75
Sh2d1aO88890 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Sh2d1aO88890 Gm11764-201ENSMUST00000120221 623 ntBASIC10.36□□□□□ -0.75
Sh2d1aO88890 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sh2d1aO88890 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Sh2d1aO88890 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Sh2d1aO88890 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC10.36□□□□□ -0.75
Sh2d1aO88890 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Sh2d1aO88890 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC10.36□□□□□ -0.75
Sh2d1aO88890 Gm18195-201ENSMUST00000207604 706 ntBASIC10.36□□□□□ -0.75
Sh2d1aO88890 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC10.36□□□□□ -0.75
Sh2d1aO88890 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC10.36□□□□□ -0.75
Sh2d1aO88890 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Sh2d1aO88890 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sh2d1aO88890 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sh2d1aO88890 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sh2d1aO88890 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Sh2d1aO88890 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Sh2d1aO88890 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Sh2d1aO88890 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sh2d1aO88890 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sh2d1aO88890 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sh2d1aO88890 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Sh2d1aO88890 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sh2d1aO88890 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sh2d1aO88890 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sh2d1aO88890 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sh2d1aO88890 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sh2d1aO88890 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sh2d1aO88890 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sh2d1aO88890 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sh2d1aO88890 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sh2d1aO88890 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sh2d1aO88890 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Sh2d1aO88890 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sh2d1aO88890 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC10.35□□□□□ -0.75
Sh2d1aO88890 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sh2d1aO88890 Gm43509-201ENSMUST00000196551 2594 ntBASIC10.35□□□□□ -0.75
Sh2d1aO88890 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Sh2d1aO88890 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sh2d1aO88890 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
Sh2d1aO88890 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sh2d1aO88890 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sh2d1aO88890 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sh2d1aO88890 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sh2d1aO88890 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sh2d1aO88890 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sh2d1aO88890 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sh2d1aO88890 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sh2d1aO88890 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sh2d1aO88890 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sh2d1aO88890 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sh2d1aO88890 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sh2d1aO88890 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sh2d1aO88890 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sh2d1aO88890 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sh2d1aO88890 Gm43767-201ENSMUST00000198933 381 ntBASIC10.35□□□□□ -0.75
Sh2d1aO88890 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC10.35□□□□□ -0.75
Sh2d1aO88890 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC10.35□□□□□ -0.75
Sh2d1aO88890 AC138767.1-201ENSMUST00000222661 415 ntBASIC10.35□□□□□ -0.75
Sh2d1aO88890 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sh2d1aO88890 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Sh2d1aO88890 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Sh2d1aO88890 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sh2d1aO88890 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sh2d1aO88890 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sh2d1aO88890 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sh2d1aO88890 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sh2d1aO88890 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sh2d1aO88890 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sh2d1aO88890 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sh2d1aO88890 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sh2d1aO88890 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sh2d1aO88890 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Sh2d1aO88890 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sh2d1aO88890 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sh2d1aO88890 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sh2d1aO88890 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sh2d1aO88890 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sh2d1aO88890 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sh2d1aO88890 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sh2d1aO88890 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sh2d1aO88890 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sh2d1aO88890 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Sh2d1aO88890 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sh2d1aO88890 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC10.34□□□□□ -0.75
Sh2d1aO88890 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sh2d1aO88890 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sh2d1aO88890 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC10.34□□□□□ -0.75
Sh2d1aO88890 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms