Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Best1O88870 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Best1O88870 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Best1O88870 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Best1O88870 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Best1O88870 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.01□□□□□ -0.17
Best1O88870 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Best1O88870 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Best1O88870 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Best1O88870 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Best1O88870 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Best1O88870 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Best1O88870 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Best1O88870 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Best1O88870 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Best1O88870 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Best1O88870 Gm12151-201ENSMUST00000121374 290 ntBASIC14.01□□□□□ -0.17
Best1O88870 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.01□□□□□ -0.17
Best1O88870 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Best1O88870 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Best1O88870 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.01□□□□□ -0.17
Best1O88870 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Best1O88870 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Best1O88870 Mir125a-201ENSMUST00000083545 68 ntBASIC14.01□□□□□ -0.17
Best1O88870 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Best1O88870 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Best1O88870 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Best1O88870 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Best1O88870 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Best1O88870 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Best1O88870 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Best1O88870 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Best1O88870 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Best1O88870 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Best1O88870 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Best1O88870 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Best1O88870 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Best1O88870 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14□□□□□ -0.17
Best1O88870 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Best1O88870 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Best1O88870 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14□□□□□ -0.17
Best1O88870 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Best1O88870 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14□□□□□ -0.17
Best1O88870 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Best1O88870 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Best1O88870 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Best1O88870 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14□□□□□ -0.17
Best1O88870 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Best1O88870 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Best1O88870 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14□□□□□ -0.17
Best1O88870 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14□□□□□ -0.17
Best1O88870 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14□□□□□ -0.17
Best1O88870 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14□□□□□ -0.17
Best1O88870 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14□□□□□ -0.17
Best1O88870 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14□□□□□ -0.17
Best1O88870 Gm3436-201ENSMUST00000179930 840 ntBASIC14□□□□□ -0.17
Best1O88870 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14□□□□□ -0.17
Best1O88870 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14□□□□□ -0.17
Best1O88870 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14□□□□□ -0.17
Best1O88870 Gm46209-201ENSMUST00000217912 553 ntBASIC14□□□□□ -0.17
Best1O88870 AC155729.1-201ENSMUST00000227758 544 ntBASIC14□□□□□ -0.17
Best1O88870 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Best1O88870 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14□□□□□ -0.17
Best1O88870 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Best1O88870 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14□□□□□ -0.17
Best1O88870 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Best1O88870 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Best1O88870 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Best1O88870 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Best1O88870 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14□□□□□ -0.17
Best1O88870 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Best1O88870 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Best1O88870 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Best1O88870 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Best1O88870 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Best1O88870 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Best1O88870 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Best1O88870 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Best1O88870 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14□□□□□ -0.17
Best1O88870 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Best1O88870 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Best1O88870 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.99□□□□□ -0.17
Best1O88870 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Best1O88870 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Best1O88870 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Best1O88870 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.99□□□□□ -0.17
Best1O88870 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.99□□□□□ -0.17
Best1O88870 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Best1O88870 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Best1O88870 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Best1O88870 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Best1O88870 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Best1O88870 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.99□□□□□ -0.17
Best1O88870 Gm9229-201ENSMUST00000222777 126 ntBASIC13.99□□□□□ -0.17
Best1O88870 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.99□□□□□ -0.17
Best1O88870 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Best1O88870 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.99□□□□□ -0.17
Best1O88870 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Best1O88870 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Best1O88870 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms